| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0994 |
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| Symbol | |
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| ID | 8332328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1133539 |
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| End bp | 1135413 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954143 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003111763 |
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| Protein GI | 256390199 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.165504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00173885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGGAG CCACGGGGCT CACCGCCGGT GCGAAAGTCC TGATCACCGG CGGCGCCGGC
TTCATCGGCT CCACGGTCGC CTCCGCCTGC CTGGACGCCG ACCTGGTCCC GGTGATCCTG
GACAACCTGT CCACCGGCCG CAGCGAGTTC ACCGAGGGCC GGATCTTCTA TGAGGGCGAC
ATCGCCGACG CCGCGCTCCT CGACCGGGTC TTCGCCGCGC AGCCGGACAT CGCCGCGGCA
GTGCACTGCG CGGCGCTGAC GAACGTGCCG GAGTCGGTCG CCAACCCGAT CCGGTACTAC
CGCGAGAACG TCACCAAGAC CCTGGAGCTG ATCGAGGGGT TGGTCCGCAA CGGCTGCCGC
CGCATGGTGT TCTCCTCCTC CGCGTCCGTC TACGCCGCGG GTTCCTCCGG TCCTTACGCG
CGCTCTAAGG CGATCACGGA GTGGGTGCTG GAGGACGTGG CGCGCGCCGG CGATCTGCAA
GCCGTCGCCC TGCGCTACTT CACCCCGATC GGCGCCGATC CTGACTTCCA TACCGGTACT
CCGAGCCCGG AAGCGCTGCA TGTCCTGGAC AAGGTGACCA CCGCCTACCG GAGCGACGAG
CCGTTTCACA TCGCTGGCAC CGACTTCTCG CCCTTCGATA GCCGCCGCGA CGCTCGCGAC
TACATCCATG TCTGGGACCT GGCTGAGGCG CACGTCGCGG CGCTGCGGAA CTTCGACGCG
ATCGTGGCGC GCCATGCGTC CCACACCGTC CCGTACGAGG TGATCAATCT CGGCGCCGGG
GACGGTACGA CGGTCCCCCA GCCGGCTCTC GAGGCGCGTC AGCCGCTCGG CTGGGCGCCG
CGGTACTCCG TCGGGACGGG TATTCGGGAC GCGCTGACGT GGGCTCGCGT GCGTGCCGGT
CTGCCCGCGC CGGCGCGGGT CCGGGCCGCG AAGCCCGCCT CGGTCGTCGA TGTCCTGATG
CCGTACTACG GCGACGTCGG CATGATGCAG GAGGCGGTAC GCAGCGTCCT GGCACAGCGT
GACCAGCACT GGCGGCTGAC GGTGGTCGAC GACGGCGCCG AGCCGGGCGT CCCGGAGTGG
TTCGCCGGCC TGATCGCCGA GCACGGACCC GACAAGATCC GCTACCAGCG CAACCCGGTC
AACCTCGGCA TCACCGAGAA CTTCCAGAAA TGCCTGAGCC TGGTCACCCA TCCGCTGGTC
ACCATGATCG GCTGCGACGA CCGCATGCTT CCGGACTACA TCGGAACCGT CCGAGCCCTG
ATGCGCGACT ACCCCCGCGT CTCCCTCGCC CAGCCCGGCG TGGAGGTCAT CGACGGAGCC
GGCGAGGTCG TCGAACCCTG GGTCGACAAG GTCAAGCGGC GCCTCTACGC CCCCCGCGTC
CATGGCGCCC TGGTCCTGAG CGGCGAATCC CTGGCCGTCA GCCTCCTGCG CGGCAACTGG
ATGTACTTCC CAGCCATCTG CTGGCGCGCC GACGTCATCA CCGAAGTCGG CTTCGACCCC
CACCTCCGCG TGATCCAGGA CCTGGCCCTG ACCCTCGAGT GGGTCCGCGC CGGCGCCCAG
ATCGTCGTCA GCGACACCAT CTGCTTCCAG TACCGCCGCC ACGCAGTCAG CCTCTCCAGC
GAACAAGCCA CCACCGGCGC CCGCTTCACC GAAGAACGCA CCTTCTTCCT CGACGAAGCC
GCCCGCATGG ACCGCCTAGG CTGGCGCCAC GCCGCCCGCA CAGCCCGCCT CCACCTCTCC
TCACGCCTCC ACGCGGCCAC GATGCTCCCC AGCGCCCTCC GCCGCGGCAG CCGCGACGGC
GTCCGAACCC TGGCGGCCTA CGCCTTCGGA CCCTCCCGGC GCCCCGGAGG CTCGAGCGGA
GGACCAGCAC GGTGA
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| Protein sequence | MSGATGLTAG AKVLITGGAG FIGSTVASAC LDADLVPVIL DNLSTGRSEF TEGRIFYEGD
IADAALLDRV FAAQPDIAAA VHCAALTNVP ESVANPIRYY RENVTKTLEL IEGLVRNGCR
RMVFSSSASV YAAGSSGPYA RSKAITEWVL EDVARAGDLQ AVALRYFTPI GADPDFHTGT
PSPEALHVLD KVTTAYRSDE PFHIAGTDFS PFDSRRDARD YIHVWDLAEA HVAALRNFDA
IVARHASHTV PYEVINLGAG DGTTVPQPAL EARQPLGWAP RYSVGTGIRD ALTWARVRAG
LPAPARVRAA KPASVVDVLM PYYGDVGMMQ EAVRSVLAQR DQHWRLTVVD DGAEPGVPEW
FAGLIAEHGP DKIRYQRNPV NLGITENFQK CLSLVTHPLV TMIGCDDRML PDYIGTVRAL
MRDYPRVSLA QPGVEVIDGA GEVVEPWVDK VKRRLYAPRV HGALVLSGES LAVSLLRGNW
MYFPAICWRA DVITEVGFDP HLRVIQDLAL TLEWVRAGAQ IVVSDTICFQ YRRHAVSLSS
EQATTGARFT EERTFFLDEA ARMDRLGWRH AARTARLHLS SRLHAATMLP SALRRGSRDG
VRTLAAYAFG PSRRPGGSSG GPAR
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