| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0984 |
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| Symbol | acpS |
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| ID | 8332318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1123487 |
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| End bp | 1123837 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954136 |
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| Product | 4'-phosphopantetheinyl transferase |
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| Protein accession | YP_003111756 |
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| Protein GI | 256390192 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
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| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.709677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00323316 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATCTTGG GAGTGGGCAT CGACGTGGTG GACGTCGACC GGTTCGCCGC GTCGCTGGCC
CGCACCCCGG CGCTGCGCGA GAAGCTCTTC ACGCCCGCAG AGCGCGAACG CGGCACAGCC
TCCCTGGCCG CACGCTTCGC CGCGAAGGAA GCACTCGCCA AGTCCCTCGG CGCCCCCCGC
GGCCTGCGCT GGCACGACGG CGAGGTGGTC ACCCTCCCCG ACGGCCGCCC CGAGCTGCGC
GTGACCGGAA CGGTTGCGGC ACTGGCCGAG TCCCGCGGCA TCCGCGTGTT CCACGTGTCG
CTGTCGCACG ACGCCGGGAT CGCTTCGGCG GTGGTGATCG CCGAGGGGTG A
|
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| Protein sequence | MILGVGIDVV DVDRFAASLA RTPALREKLF TPAERERGTA SLAARFAAKE ALAKSLGAPR
GLRWHDGEVV TLPDGRPELR VTGTVAALAE SRGIRVFHVS LSHDAGIASA VVIAEG
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