| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0980 |
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| Symbol | |
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| ID | 8332314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1119144 |
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| End bp | 1119647 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644954132 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003111752 |
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| Protein GI | 256390188 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.142363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0113176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG AGGAGGACTT CCGGCAGTTT GCCGCGAGCC GCCAGAAACA GTTGCTGCGC
AGCGCGTATC TGTTGTGCGG CGACTGGCAT GGCGCCGAGG ACCTGGTGCA GACCGCCTTC
GGGCAGCTGT ACCGGTCATG GCACCGGGTT AGGCGCGTCG AGCATCCGGA CGCCTACGCC
AAGCAAGTGC TGTACCGCTG CCACCTGTCG GCGAAACGGA AGCGGCGGTT CACGACCGTG
TCCATCGACT CTGTCCTGGA ACCTGCTGCG TCCGGCGACG GTTTTGGAGA CGGCAGCACC
GGCGTCCTCT TGGAGGCTCT CGCCGGCCTG CCGGACCGGG CCCGAGCCGT AGTGGTGCTG
AGGTTCTGGG AGGACTACTC GGTCGCGCAG ACCGCTGAAG CCCTCGGCGT ATCGCAGGGG
ACTGTGAAGA GTCAGTCCTC GCGCGCCCTG GCGCTGCTGC GAGAGCGGAT CGGCGACTCG
TTCAGCGACA TCGGTCAAGA CTGA
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| Protein sequence | MSDEEDFRQF AASRQKQLLR SAYLLCGDWH GAEDLVQTAF GQLYRSWHRV RRVEHPDAYA
KQVLYRCHLS AKRKRRFTTV SIDSVLEPAA SGDGFGDGST GVLLEALAGL PDRARAVVVL
RFWEDYSVAQ TAEALGVSQG TVKSQSSRAL ALLRERIGDS FSDIGQD
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