| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0975 |
|---|
| Symbol | |
|---|
| ID | 8332309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1113976 |
|---|
| End bp | 1115151 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954127 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003111747 |
|---|
| Protein GI | 256390183 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0274724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG CCACGACATC GACGGCGCAT CCGGCCGTCC CGGCGGCGTC CGCCGCCGTG
ATCGAGGCGT CCGGCCTCAC CAAGCGCTAC AACGGCGCGG CCCGGGGGGC GGTGACGGCG
CTGGACGGGC TGACGCTGTC CGTCCCGGCC GGCGTCATCG GGCTGGTCGG GGCGAACGGG
GCGGGCAAGT CGACGCTGAT CAAGATCCTG CTCGGGCTGC TCGCGCCGTC CTCCGGGTCG
GCCGCGGTAC TCGGGTACGA CGTGGTCGAC CAGGCGGAGC GCATCAGGAC CCTGGTCGGC
TACATGCCCG AACACGACTG CCTGCCGCCG GACGTGACCG CCACGGAGTT CGTCACGCAC
ATGGGCCGCA TGGGCGGACT CCCCCCGACC GCCGCCAAGG AGCGCGCCGC GGAGTCGCTG
CGCCACGTAG GCCTCCACGA GGAGCGCTAC CGCCTGATCG GCACCTACTC CACCGGCATG
AAGCAGCGGG TGAAGCTGGC CCAGGCCCTC GTCGGCGACC CCCGCCTGCT CCTGCTGGAC
GAGCCCACCA ACGGCCTGGA CCCGGCCGGC CGCGAGGCGA TGCTCGACCT GATCGAACGG
ATCGGCGCGG AGTTCGGCAT CTCCATCCTC GTCGCCTCCC ACCTGCTCGG CGAGATCGAG
CAGATCTGCG ACTCCCTGGT GGCCATCGAG AGCGGCAAAC TCCTGCGCGC CGCCTCCATG
TCCGCCTTCA CCAAGGCCAG CGCGGTCCTC GCCGTCGAGG TCGACGAGGG CGCCGCCAAG
CTCGCCGCCG CCCTGAAGAA CGCCGGACTC ACCCCCCGCC GCGACGGCCG CGCCCTGCTG
GTCCGCCTCG GCGGCACCGA GCAGGAATCC GACCTGGTCT ACGACGCCAT CCGCGACGCC
GTGGCCGACC TCGGCCTGCC CCTGAACCGG CTGGAGCGGC GGCGGCACCG GGTGGAGGAG
CTGTTCGCCG ACGAGGACTT CGACGACCTG GACGACCTCG ACGCCACCTC ATCAGCCACT
GCCGCCACTG CCACCACCAC CGCCGCCAGC CCCGCCGCAT CACCCACTCC CGCCCCACCC
TCACCCCCCG CCGCCGAAGC CCCCGCCGAA GCCGAAGCGG CCGACGCCGA AGCGGCCGAC
GCCGAAGCCG CCGAGAGCGA GACCGACCAT GAGTAG
|
|---|
| Protein sequence | MTTATTSTAH PAVPAASAAV IEASGLTKRY NGAARGAVTA LDGLTLSVPA GVIGLVGANG
AGKSTLIKIL LGLLAPSSGS AAVLGYDVVD QAERIRTLVG YMPEHDCLPP DVTATEFVTH
MGRMGGLPPT AAKERAAESL RHVGLHEERY RLIGTYSTGM KQRVKLAQAL VGDPRLLLLD
EPTNGLDPAG REAMLDLIER IGAEFGISIL VASHLLGEIE QICDSLVAIE SGKLLRAASM
SAFTKASAVL AVEVDEGAAK LAAALKNAGL TPRRDGRALL VRLGGTEQES DLVYDAIRDA
VADLGLPLNR LERRRHRVEE LFADEDFDDL DDLDATSSAT AATATTTAAS PAASPTPAPP
SPPAAEAPAE AEAADAEAAD AEAAESETDH E
|
|---|
| |