Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0971 |
Symbol | rplM |
ID | 8332305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1109311 |
End bp | 1109754 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644954123 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_003111743 |
Protein GI | 256390179 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.704336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0786185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTACGT TCAGTCCCAA GCCCGGTGAC GTTCAGCGTC AGTGGCACGT CATCGATGCC CGCGACGTCG TCCTCGGCCG TCTCGCCTCG CAGACCGCGC AGCTTCTGCG CGGGAAGCAC AAGGCGATCT TCGCGCCGCA CGTCGACACC GGCGACTTCG TCATCATCAT CAACGCCGAG AAGGTTCACC TCTCGGGCAA CAAGCGCGAG GACAAGCTCG CTTACCGGCA CTCCGGCTAC CCGGGCGGTC TGCGCTCGAT CAAGTACGGC GACCTGATCG ACAAGGACCC GCGCAAGGCC GTCGAGAAGG CCGTCCGCGG CATGCTGCCG AAGAACTCCC TGGGCCGCCA GCAGCTCTCG AAGCTGAAGG TGTACCGCGG CGAGGAGCAC CCCCACGCCG CGCAGAAGCC CGAGCCCTTC GTCATCAACC AGGTCGCGCA GTAG
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Protein sequence | MRTFSPKPGD VQRQWHVIDA RDVVLGRLAS QTAQLLRGKH KAIFAPHVDT GDFVIIINAE KVHLSGNKRE DKLAYRHSGY PGGLRSIKYG DLIDKDPRKA VEKAVRGMLP KNSLGRQQLS KLKVYRGEEH PHAAQKPEPF VINQVAQ
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