| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0966 |
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| Symbol | |
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| ID | 8332300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1105469 |
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| End bp | 1106323 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954119 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003111739 |
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| Protein GI | 256390175 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.982634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.313334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG AGCCCGCCCC CGGCCACGTC CGCGTCCGTC TCGACCTGGC CTATGACGGC
ACGCACTTCT CCGGCTGGGC GATTCAGCCG AAGCGGCGGA CCGTTTGCGG GGAGCTGACC
TCGGCGTTGT CCACGGTGCT GCGGCAGGAC GTGACGCTGG TCGTGGCCGG GCGCACCGAC
GCCGGGGTCC ACGCCAGCGG CCAGGTCGCG CACCTCGATG TACCGCTCGA GCTGTGGGCC
GAGCACGAGG AGCGGCTGCT GCGAAGGCTG GCTGCCGTTC TGCCAGGCGA TGTACGGGTC
TGGTCCGCCG TACCCGCACC GGTGGGCTTC GACGCCCGCT TCGCCGCGAT GGGGCGCCGC
TACGCCTACC GCGTCACCGA CGCCGCCTAC GGCCCGCACC CGCTGCGCCG CAACGACGTC
ACCTGGCACC CGCGAACGCT GGATCCGGCG CTGATGAACG AGGCGGCGGC CGCCCTGCTC
GGCGAGCACG ACTTCGCCTC CTTCTGCAAG AAACGCGAGG GCGCGACCAC CATCCGCTGC
CTCACGCGCC TGGAGTGGAC CCGCGAGGCG CCGACGTCAC TGACGCCGGT CGGCTTGCTC
GTGGCCGACG TCCGCGCCGA CGCCTTCTGC CACTCCATGG TCCGCTCGCT GGTCGGCGCA
CTGCTGGCGG TGGGGGAGGG GCGCCGTCCG GTCGGCGATC CGGGACGCAT CCTCGCCGAG
GAGGTCCGCT CGCCGGAGGT GAAGGTGGCG CCGCCGCAAG GGCTGACGCT GGAGGAGGTC
GTCTATCCCG CCGACGCCGA ACTGGCCGGC CAGCAGCTGA AGACGCGGCG GATCAGGGTG
CTGGGAGCGG ACTAG
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| Protein sequence | MSTEPAPGHV RVRLDLAYDG THFSGWAIQP KRRTVCGELT SALSTVLRQD VTLVVAGRTD
AGVHASGQVA HLDVPLELWA EHEERLLRRL AAVLPGDVRV WSAVPAPVGF DARFAAMGRR
YAYRVTDAAY GPHPLRRNDV TWHPRTLDPA LMNEAAAALL GEHDFASFCK KREGATTIRC
LTRLEWTREA PTSLTPVGLL VADVRADAFC HSMVRSLVGA LLAVGEGRRP VGDPGRILAE
EVRSPEVKVA PPQGLTLEEV VYPADAELAG QQLKTRRIRV LGAD
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