Gene Caci_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0962 
Symbol 
ID8332296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1102507 
End bp1102917 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID644954115 
Productribosomal protein S11 
Protein accessionYP_003111735 
Protein GI256390171 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.837228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCC AGAGCCGTAA GGCCGGCGCC AAGGCTCCCA AGCTGCGCCG CAAGGAAAAG 
AAGAACGTCG CCCACGGGCA CGCTCACATC AAGAGCACGT TCAACAACAC CATCGTCTCG
ATCACCGACC CGCAGGGCAA CGTGATCGCG TGGGCGAGCT CGGGTCAGGT GGGCTTCAAG
GGCTCGCGCA AGTCGACCCC GTTCGCCGCT CAGATGACCG CCGAGGCCGC CGCCCGCCGG
GCCATGGAGC ACGGCATGAA GAAGGTCGAC GTCTTCGTCA AGGGTCCCGG CTCCGGCCGC
GAGACCGCCA TCCGGTCGCT GCAGCAGACC GGCCTGGAGG TCGGATCCAT CAACGACGTC
ACCCCTTCGC CGCACAACGG CTGCCGTCCG CCGAAGCGCC GGCGCGTCTG A
 
Protein sequence
MPPQSRKAGA KAPKLRRKEK KNVAHGHAHI KSTFNNTIVS ITDPQGNVIA WASSGQVGFK 
GSRKSTPFAA QMTAEAAARR AMEHGMKKVD VFVKGPGSGR ETAIRSLQQT GLEVGSINDV
TPSPHNGCRP PKRRRV