Gene Caci_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0961 
Symbol 
ID8332295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1102052 
End bp1102432 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID644954114 
Productribosomal protein S13 
Protein accessionYP_003111734 
Protein GI256390170 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTC TCTCTGGTGT GGACATCCCG CGCGAAAAGC GTCTGGAGAT CGCCCTCACC 
TACATCTACG GCATCGGCCG CACCCGCTCG CAGAAGACGT GCGCGGAGAC CGGCATCAAC
CCGAACACGC GCGTGAAGGA CCTGACGGAG GACGACCTCG TCAAGCTCCG CCAGTGGATC
GACACGAACT ACCGCGTCGA GGGCGACCTG CGCCGTGAGG TCCAGGCGGA CATCCGCCGC
AAGATCGAGA TCGGCTGCTA CCAGGGCGTC CGGCACCGCA AGGGGCTGCC GGTCCATGGT
CAGCGCACCC ACACCAACGC GCGTACGCGC AAGGGCCCGC GCAAGGCCAT CGCCGGCAAG
AAGAAGGCCG GCCGGAAGTA G
 
Protein sequence
MARLSGVDIP REKRLEIALT YIYGIGRTRS QKTCAETGIN PNTRVKDLTE DDLVKLRQWI 
DTNYRVEGDL RREVQADIRR KIEIGCYQGV RHRKGLPVHG QRTHTNARTR KGPRKAIAGK
KKAGRK