| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0958 |
|---|
| Symbol | |
|---|
| ID | 8332292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1100344 |
|---|
| End bp | 1100979 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644954111 |
|---|
| Product | protein of unknown function DUF1707 |
|---|
| Protein accession | YP_003111731 |
|---|
| Protein GI | 256390167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC AGGGTGGGGC CTCGTTCGAT CCTGATATGC GCGCCGGCGA CGCCGACCGC
GAACGCCTCG TGGAGGAACT TCGCGAGCAG CACGCGGCCG GGCGGCTGAC GCTCGAGGAG
TTCGACGAGC GCATGACCAA GGCCTATGCG GCCAAGACGT ACGGCGAGCT GCGCACGCTC
ACCCGGGACC TGCCGGTGGA CCTCGCGCAG CTGAACATCC AGCAGGCGCA GCAGCGCACC
GCGCAGCCCT CGCAGCGGCC GGTCGAGGTG CGCCGCGACG GGTCCGGCCG GATGCAGATC
AACATCGACA ACCAGGCCAT CCAGGACCGC ATCAACCACC ACGTGGAGCG GCAGACCGAG
CGCTGGCAGC GCCACCAGGA CCGGCACCAG CAGCGCTGGA CGCAGCAGCA GGAGCGCTGG
CAGCAGGCGG CGGCGCGGCG CGGCGGGCGC GGCGGGCACG GGCTGCGCAG CGCGATCGCG
TTCAGCTCCT GGCTCTCGCT CTCGGTGCTG CTCACCGGGA TCTGGCTGGT CGGCAACCTG
GCCGGCGGCC ACGACTGGGG CAACTTCTGG CCGATTTGGC CGATCGGGAT CACGGGCGTG
CTGATGGTCG CCCGGGGGAT CAACCGGCGG AACTGA
|
|---|
| Protein sequence | MTTQGGASFD PDMRAGDADR ERLVEELREQ HAAGRLTLEE FDERMTKAYA AKTYGELRTL
TRDLPVDLAQ LNIQQAQQRT AQPSQRPVEV RRDGSGRMQI NIDNQAIQDR INHHVERQTE
RWQRHQDRHQ QRWTQQQERW QQAAARRGGR GGHGLRSAIA FSSWLSLSVL LTGIWLVGNL
AGGHDWGNFW PIWPIGITGV LMVARGINRR N
|
|---|
| |