Gene Caci_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0957 
Symbol 
ID8332291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1099104 
End bp1100240 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content73% 
IMG OID644954110 
Producthistidine kinase 
Protein accessionYP_003111730 
Protein GI256390166 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATC ACGTGCAGAG CACGGACACC CGACTGATCG AGACCCTCCG GCTCCGGCGG 
CCGCGGCGCG ACGACGTCCT GGTGGCCGCC ATCGTGCTGC TTCTGAACAG CGGAACGTAT
CTGATACCCG GCATCGTGCC CTGGGGACCG TGGCGGTATC TGCTGGAGAC GGCGACGATC
GTGCCGCTGC TGTGGCGGGA GTCCGTGCCG GTCCCCTCCG CGCTGGCCAC CGGGGCGCTC
ACGCTGATCG TCACCGCCAC CGTGCACCCG GCGCAACCCT TTCCGTACGC GGTCCTGGTC
ACGCAGTACA CGATCGGCTC GGTCCTGCGC GGCCGGACCC GGGGTGTCCT GGTCGGCCTG
TTCATGGCCG GCAACGTCGT CGCCGAGGCG CTGCACCAGC AATGGGGCAA TCCAGAAGAC
TTCCTGGTCA CCTTCACCCT CAGCCTGACC GCGCTGTTCC TCGGTGTCCT GATGCAGTCC
GAGCACGACT CGCTGTCGGT GCGGGCCGAC CGCGCGCTGC AGGCCGAACG GGTCCGGATC
GCCCGCGACA TGCACGACGT GGTCGGCCAC GCCGTGGCGC TGATGGTCGT GCAGGCCGAA
GCCGGTCCGC TGCTGGTGCG GGACAAGCCG GAGCGCGCCG AGGCGGCGTT CGAGGCCATC
TCGGCGGCCG GCCGCGACGC GATGGCCCAG CTGCGCGGCC TGCTCGGCAC GCTCCACCAG
GACGAGGGCG GCGGCCGCGA CCCGCTGCCC ACCCTGGCCG ACCTCGACGA CCTGGTGCAC
CAGGTCCGCA AGGCCGGGCT CCAGGTCCGC ATCGAGCACA CCGGCAGCGC CTCGCCGCTG
TCGCCCGGCG CCGAGACCGC CGCCTACCGG GTGGTGCAGG AAGCCCTCAC CAATACCCTG
AAACACGCTC AAGCCTCGCG CGCCGAGGTC CGCCTGAGCT GGGCGCCGAG CGCGCTGGAG
ATCACGGTGG CGGACAACGG CCGGGGCGCC GGCGACGGCT CGGCGGACGG TGGCGGCGGG
CACGGCCTGA CCGGTCTGCG GGAGCGGCTG GCGCCGGTGG GCGGCGCGCT GAGCTGGACC
TCTCCGCCGG ACACCGGCGG GTTCGCGCTG ACCGCGGTCA TCCCCTCCGG GCAGTAG
 
Protein sequence
MIYHVQSTDT RLIETLRLRR PRRDDVLVAA IVLLLNSGTY LIPGIVPWGP WRYLLETATI 
VPLLWRESVP VPSALATGAL TLIVTATVHP AQPFPYAVLV TQYTIGSVLR GRTRGVLVGL
FMAGNVVAEA LHQQWGNPED FLVTFTLSLT ALFLGVLMQS EHDSLSVRAD RALQAERVRI
ARDMHDVVGH AVALMVVQAE AGPLLVRDKP ERAEAAFEAI SAAGRDAMAQ LRGLLGTLHQ
DEGGGRDPLP TLADLDDLVH QVRKAGLQVR IEHTGSASPL SPGAETAAYR VVQEALTNTL
KHAQASRAEV RLSWAPSALE ITVADNGRGA GDGSADGGGG HGLTGLRERL APVGGALSWT
SPPDTGGFAL TAVIPSGQ