Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0957 |
Symbol | |
ID | 8332291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1099104 |
End bp | 1100240 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954110 |
Product | histidine kinase |
Protein accession | YP_003111730 |
Protein GI | 256390166 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTATC ACGTGCAGAG CACGGACACC CGACTGATCG AGACCCTCCG GCTCCGGCGG CCGCGGCGCG ACGACGTCCT GGTGGCCGCC ATCGTGCTGC TTCTGAACAG CGGAACGTAT CTGATACCCG GCATCGTGCC CTGGGGACCG TGGCGGTATC TGCTGGAGAC GGCGACGATC GTGCCGCTGC TGTGGCGGGA GTCCGTGCCG GTCCCCTCCG CGCTGGCCAC CGGGGCGCTC ACGCTGATCG TCACCGCCAC CGTGCACCCG GCGCAACCCT TTCCGTACGC GGTCCTGGTC ACGCAGTACA CGATCGGCTC GGTCCTGCGC GGCCGGACCC GGGGTGTCCT GGTCGGCCTG TTCATGGCCG GCAACGTCGT CGCCGAGGCG CTGCACCAGC AATGGGGCAA TCCAGAAGAC TTCCTGGTCA CCTTCACCCT CAGCCTGACC GCGCTGTTCC TCGGTGTCCT GATGCAGTCC GAGCACGACT CGCTGTCGGT GCGGGCCGAC CGCGCGCTGC AGGCCGAACG GGTCCGGATC GCCCGCGACA TGCACGACGT GGTCGGCCAC GCCGTGGCGC TGATGGTCGT GCAGGCCGAA GCCGGTCCGC TGCTGGTGCG GGACAAGCCG GAGCGCGCCG AGGCGGCGTT CGAGGCCATC TCGGCGGCCG GCCGCGACGC GATGGCCCAG CTGCGCGGCC TGCTCGGCAC GCTCCACCAG GACGAGGGCG GCGGCCGCGA CCCGCTGCCC ACCCTGGCCG ACCTCGACGA CCTGGTGCAC CAGGTCCGCA AGGCCGGGCT CCAGGTCCGC ATCGAGCACA CCGGCAGCGC CTCGCCGCTG TCGCCCGGCG CCGAGACCGC CGCCTACCGG GTGGTGCAGG AAGCCCTCAC CAATACCCTG AAACACGCTC AAGCCTCGCG CGCCGAGGTC CGCCTGAGCT GGGCGCCGAG CGCGCTGGAG ATCACGGTGG CGGACAACGG CCGGGGCGCC GGCGACGGCT CGGCGGACGG TGGCGGCGGG CACGGCCTGA CCGGTCTGCG GGAGCGGCTG GCGCCGGTGG GCGGCGCGCT GAGCTGGACC TCTCCGCCGG ACACCGGCGG GTTCGCGCTG ACCGCGGTCA TCCCCTCCGG GCAGTAG
|
Protein sequence | MIYHVQSTDT RLIETLRLRR PRRDDVLVAA IVLLLNSGTY LIPGIVPWGP WRYLLETATI VPLLWRESVP VPSALATGAL TLIVTATVHP AQPFPYAVLV TQYTIGSVLR GRTRGVLVGL FMAGNVVAEA LHQQWGNPED FLVTFTLSLT ALFLGVLMQS EHDSLSVRAD RALQAERVRI ARDMHDVVGH AVALMVVQAE AGPLLVRDKP ERAEAAFEAI SAAGRDAMAQ LRGLLGTLHQ DEGGGRDPLP TLADLDDLVH QVRKAGLQVR IEHTGSASPL SPGAETAAYR VVQEALTNTL KHAQASRAEV RLSWAPSALE ITVADNGRGA GDGSADGGGG HGLTGLRERL APVGGALSWT SPPDTGGFAL TAVIPSGQ
|
| |