| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0949 |
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| Symbol | rpmD |
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| ID | 8332283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1090732 |
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| End bp | 1090914 |
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| Gene Length | 183 bp |
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| Protein Length | 60 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644954102 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_003111722 |
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| Protein GI | 256390158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.235553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGTT TGAAGATCAC GCAGACCCGC TCCAAGATCG GGACCAAGCA GAACCACCGG
GACACCCTCC GGTCGCTCGG TCTGAAGCGG ATCAACGACA CCGTGGTGAA GGAGGACCTC
CCGCAGTTCC GCGGCATGGT CCACACCGTT CGCCACCTGG TCAAGGTCGA GGAGGTCGAC
TGA
|
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| Protein sequence | MARLKITQTR SKIGTKQNHR DTLRSLGLKR INDTVVKEDL PQFRGMVHTV RHLVKVEEVD
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