Gene Caci_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0940 
Symbol 
ID8332274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1086735 
End bp1087016 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content66% 
IMG OID644954093 
Productribosomal protein S17 
Protein accessionYP_003111713 
Protein GI256390149 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.138584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC AGACGGTGGA GAACACCGAG GAGCGTGGCG CGCGCAAGGT GCGCGAGGGG 
TACGTCGTCA GCGACAAGAT GGAGAAGACC ATCGTCGTCG AGGTCGAGGA CCGCAAGAAG
CACCCGAAGT ACCGCAAGGT CGTGCGGCGC ACCACCAAGC TGAAGGCCCA CGACGAGCAG
AACACCGCCG GTGTCGGCGA CCGTGTCCTG CTCATGGAGA CCCGGCCGAC CTCGGCGACC
AAGCGCTGGC GCCTGGTCGA GGTTCTCGAG AAGGCCAAGT AA
 
Protein sequence
MSEQTVENTE ERGARKVREG YVVSDKMEKT IVVEVEDRKK HPKYRKVVRR TTKLKAHDEQ 
NTAGVGDRVL LMETRPTSAT KRWRLVEVLE KAK