| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0936 |
|---|
| Symbol | |
|---|
| ID | 8332270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1084825 |
|---|
| End bp | 1085217 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644954089 |
|---|
| Product | ribosomal protein L22 |
|---|
| Protein accession | YP_003111709 |
|---|
| Protein GI | 256390145 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.127783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAGA ACAAGGCCAA GGACCTCGCG GGCAATGAGG CTATTGCCCA GGCGAAGAAC
ATCCGCATGA CCGCCATGAA GGTGCGCCGG GTCGTGGACA TGGTCCGCGG CCAGGACGTC
GAGCAGGCGC TCGACACCCT GCGCTTCGCG CCGTACGCCG CCGCAGAGCC GGTCTTCAAG
TGCGTCGCGT CGGCTGCGGC CAACGCGCGC AACAACAAGC AGCTCCGCGG CTCGCTGGTC
ATCAGCGAGG CCTATGTGGA CGAGGGTCCG ACCCTGAAGC GGTTCCGGCC GCGTGCTCAG
GGCCGTGCCT ACCGCATCCG CAAGCGGACT TCGCACATCA CGATCGTGGT CCAGGAGACC
GCGGGCGTCG CGCAGAAGGG CAGGACCCGA TAG
|
|---|
| Protein sequence | MAENKAKDLA GNEAIAQAKN IRMTAMKVRR VVDMVRGQDV EQALDTLRFA PYAAAEPVFK
CVASAAANAR NNKQLRGSLV ISEAYVDEGP TLKRFRPRAQ GRAYRIRKRT SHITIVVQET
AGVAQKGRTR
|
|---|
| |