| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0918 |
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| Symbol | |
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| ID | 8332252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1067945 |
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| End bp | 1071823 |
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| Gene Length | 3879 bp |
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| Protein Length | 1292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954071 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003111691 |
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| Protein GI | 256390127 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.500947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.508605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG TCAATTTCTT CGACGAGCTC CGTATCGGTC TGGCGACTGC CGACGACATC
CGCACCTGGT CCTACGGCGA GGTGAAGAAG CCGGAGACCA TCAACTACCG CACCCTGAAG
CCGGAGAAGG ACGGGCTCTT CTGCGAGAAG ATCTTCGGCC CGACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTGCGCTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GCGCCAAGGT GCGCCGCGAG CGGATGGGCC ACATCGAGCT GGCCGCGCCG
GTGACCCACA TCTGGTACTT CAAGGGTGTG CCGTCCCGGC TGGGCTACCT GCTGGACCTG
GCGCCGAAGG ACCTGGAGAA GGTCATCTAC TTCGCCGCCT ACATGATCAC CGAGGTCGAC
GACGAGCGGC GCACCCGCGA CCTGCCCTCG CTGGAGGCCA AGGTCTCCGT CGAGCGCCAG
CAGGTCGAGA ACCGGCGCGA CGCCGACGTC GAGGCCCGGC AGAAGAAGCT GGAAGAGGAC
CTCGCGGCCC TGGAGGCCGA GGGTGCCAAG GCCGACCAGC GCCGCAAGGT CCGCGAGGGC
GGCGAGCGGG AGATGAAGCA GCTGCGCGAC CGCGCGCAGC GCGAGATCGA CCGTCTCGAC
GAGGTCTGGA ACCGGTTCAA GTCGCTGAAG GTCCAGGACC TCGAGGGCGA TGAGATCCTG
TACCGCGAGA TGCGGGACCG CTACGGCACC TACTTCTCCG GCTCGATGGG CGCCGCCGCG
CTGCAGAAGC GGCTGGAGAC CTTCGACCTG GACGCCGAGG CGGAGTCGCT GCGCGACACC
ATCCGCAACG GCAAGGGCCA GAAGAAGACC CGCGCCCTGA AGCGGCTGAA GGTCGTCGAG
GCCTTCCGCG CGACCAACAA CTCGCCCTCG GGCATGGTGT TGGACTGCGT GCCGGTCATC
CCGCCGGACC TGCGTCCGAT GGTGCAGCTG GACGGCGGCC GCTTCGCGAC CTCCGACCTG
AACGACCTGT ACCGCCGGGT GATCAACCGG AACAACCGCC TCAAGCGCCT GCTCGACCTC
GGCGCGCCCG AGATTATCGT GAACAACGAG AAGCGGATGC TGCAGGAGGC CGTGGACTCG
CTGTTCGACA ACGGCCGCCG CGGCCGTCCG GTCACCGGGC CGGGCAACCG TCCGCTGAAG
TCGCTGTCCG ACATGCTCAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTCGGCAAG
CGCGTGGACT ACTCGGCGCG TTCGGTCATC GTCGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CCAAGCAGAT GGCGCTGGAG CTGTTCAAGC CCTTCGTCAT GAAGCGGCTG
GTGGACCTGA ACCACGCGCA GAACATCAAG TCCGCCAAGC GGATGGTGGA GCGCGCGCGG
CCGGTCGTGT GGGACGTGCT GGAGGAGGTC ATCGGGGAGC ACCCGGTGCT GCTCAACCGC
GCCCCCACGC TGCACCGTCT GGGCATCCAG GCCTTCGAGC CGCAGCTGGT CGAGGGCAAG
GCGATCCAGA TCCACCCGCT GGTCTGCACC GCGTTCAACG CGGACTTCGA CGGCGACCAG
ATGGCGGTGC ACCTGCCGCT GTCCGCCGAG GCGCAGGCCG AGGCGCGCGT GCTGATGCTG
TCCTCGAACA ACATCCTGTC CCCGGCGCAC GGCCGGCCGA TCACCTCTCC GACGCAGGAC
ATGGTCCTGG GCATCTTCTT CCTCACGATG GACCGTGACG GGATGAAGGG CGAGGGCCGG
GCGTTCGGCT CGATCTCGGA GGCCATGATG GCCTTCGACA ACCGCGAGCT GGACCTGCAG
GCGCCGATCG AGCTGCGGAT CTCCGAGGCG GTGCCGCCGC GCGGCTGGGT GGCGCCGGAG
GGCTGGGAGA CCGGCCAGCC GTTCCGCCTG AAGACCTCGC TGGGCCGGGC GCTGTTCAAC
GAGCTGCTGC CGCTGGACTA CCCGTACGAG AACCGCGAGG TGGCCAAGAA GCAGCTCTCG
GCGATCGTCA ACGACCTGGC CGAGCGCTAC CCGAAGGTGA CCGTCGCGGC GACCCTGGAC
AACCTGAAGT CCTCGGGCTT CTACTGGGCG ACCCGCTCCG GCGTCACGGT GTCCGTCGAG
GACATCGTCG TGCCGCCGAA GAAGGGCGAG ATCCTCGAGG GCTACGAGGC CCAGGCCGCC
AAGATCCAAA AGCAGTACGA GCGCGGTCTG GTCACCAAGG AAGAGCGCAA CCAGGAACTC
ATCTCCATCT GGACCAAGGC CACCAACGAG GTGGCCGACG CGATGCAGGC GAACTTCTCG
AAGACGAACC CGATCTTCAT GATGGTCGAC TCCGGAGCGC GCGGTAACTT CATGCAGATG
CGGCAGATCG CCGGTATGCG CGGACTGGTC TCGAACGCCA AGAACGAGAC CATCCCGCGT
CCCATCAAGG CGTCCTTCCG CGAGGGCCTG TCGGTCGTGG AGTACTTCAT CTCCACGCAC
GGCGCCCGCA AGGGTCTGGC GGACACCGCG CTGCGCACCG CCGACTCCGG GTACCTCACC
CGGCGTCTGG TGGACGTCTC GCAGGACGTG ATCATCCGTG AGGAGGACTG CGGGACCGAG
CGCGGCATCG TGATGCCGAT CGCTTCCCGC GGCGCCGACG GCCGGCTGAT CAAGGACGAG
AACGTCGAGA ACTCCGTCTA CGCGCGCAAC ACCGCGGAGA AGGTCGTCGT CGAGAAGAAG
ACGATCCTGG ACGCCGGCGT GGACCTCGGC GACGTGGCGA TCGACAAGCT GGTCGAGGCC
GGGGTCGCGG AGGTCAAGGT CCGCTCGGTC CTGACCTGCC AGTCCAAGGT CGGAACCTGC
GCGATGTGCT ACGGCCGCTC GCTGGCCACC GGCAAGCTCG TGGACGTCGG CGAGGCGGTG
GGCATCATCG CCGCGCAGTC GATCGGCGAG CCCGGCACCC AGCTGACCAT GCGCACCTTC
CACACCGGCG GTGTGGCCGG CGACGACATC ACGCAGGGTC TGCCGCGTGT CATCGAGCTG
TTCGAGGCCC GCACGCCCAA GGGCGTGGCG CCGATCGCCG AGGCGGCCGG CCGGGTCCGG
ATCGAGGACA CCGACAAGAC CCGCAAGATC GTCATCGCCC CCGACGACCC GTCGGTGGAG
GAGGTCGCCT ACCCGGTCAG CAAGCGCACC ATGCTGCTGG TCGCGGACGA CCAGCACGTC
GAGGTCGGGC AGGAGCTCAC CAAGGGCACC GTCAACCCGC ACGACGTGCT GCGCATCCTC
GGCCAGCGCC AGGTGCAGAT CCACCTGGTG GCCGAGGTCC AGAAGGTGTA CCGCAGCCAG
GGCGTGCCGA TCCACGACAA GCACATCGAG ATCATCGTCC GGCAGATGCT GCGCCGGGTG
ACGATCATCG AGGCCGGGGA CGCCGAACTG CTCCCGGGCG AGCTGGTCGA GTTCGGCCGC
TTCGAGACCG AGAACCGCAG GGTGCTGTCC GAGGGCGGGC AGGCGGCCTC GGGCCGTCCG
CAGCTGATGG GCATCACCAA GGCCTCGCTG GCCACGGACT CCTGGCTGTC GGCCGCCTCC
TTCCAGGAGA CGACCCGCGT CCTGACCGAC GCCGCGATCA ACGGCAAGTC CGACTCGCTG
CTCGGCCTGA AGGAGAACGT GATCATCGGC AAGCTGATCC CCGCCGGGAC CGGCATGCCG
CGCTACCGCA ACATCAAGGT CGAGCCGACC GAAGAGGCGA AGGCCCAGAT GTACACGCTG
GTGGGCTACG ACGACGACTA CTCGTCGTAC AGCTTCGGCA GCGGCTCCGG CCAGGCGGTT
CCGCTGGAGG AGTACGACTT CGGCGGCTAC AGCGGCTGA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RTWSYGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYMITEVD DERRTRDLPS LEAKVSVERQ QVENRRDADV EARQKKLEED
LAALEAEGAK ADQRRKVREG GEREMKQLRD RAQREIDRLD EVWNRFKSLK VQDLEGDEIL
YREMRDRYGT YFSGSMGAAA LQKRLETFDL DAEAESLRDT IRNGKGQKKT RALKRLKVVE
AFRATNNSPS GMVLDCVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDS LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSARSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
PVVWDVLEEV IGEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQIHPLVCT AFNADFDGDQ
MAVHLPLSAE AQAEARVLML SSNNILSPAH GRPITSPTQD MVLGIFFLTM DRDGMKGEGR
AFGSISEAMM AFDNRELDLQ APIELRISEA VPPRGWVAPE GWETGQPFRL KTSLGRALFN
ELLPLDYPYE NREVAKKQLS AIVNDLAERY PKVTVAATLD NLKSSGFYWA TRSGVTVSVE
DIVVPPKKGE ILEGYEAQAA KIQKQYERGL VTKEERNQEL ISIWTKATNE VADAMQANFS
KTNPIFMMVD SGARGNFMQM RQIAGMRGLV SNAKNETIPR PIKASFREGL SVVEYFISTH
GARKGLADTA LRTADSGYLT RRLVDVSQDV IIREEDCGTE RGIVMPIASR GADGRLIKDE
NVENSVYARN TAEKVVVEKK TILDAGVDLG DVAIDKLVEA GVAEVKVRSV LTCQSKVGTC
AMCYGRSLAT GKLVDVGEAV GIIAAQSIGE PGTQLTMRTF HTGGVAGDDI TQGLPRVIEL
FEARTPKGVA PIAEAAGRVR IEDTDKTRKI VIAPDDPSVE EVAYPVSKRT MLLVADDQHV
EVGQELTKGT VNPHDVLRIL GQRQVQIHLV AEVQKVYRSQ GVPIHDKHIE IIVRQMLRRV
TIIEAGDAEL LPGELVEFGR FETENRRVLS EGGQAASGRP QLMGITKASL ATDSWLSAAS
FQETTRVLTD AAINGKSDSL LGLKENVIIG KLIPAGTGMP RYRNIKVEPT EEAKAQMYTL
VGYDDDYSSY SFGSGSGQAV PLEEYDFGGY SG
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