Gene Caci_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0866 
Symbol 
ID8332196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1006366 
End bp1006980 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID644954016 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003111640 
Protein GI256390076 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.183272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACC TCGAAGATGG GTTGGTGAAC GGATACGCAG TCGTCGATGT CGAAACTTCC 
GGATTCCAGC CTCCGATCGC CGAGATCCTG GAAGTCGCGA TCGTGCATGT AGACGCCACC
GGGCAGGTGA CGGGCAGTTG GGACAGTCTG CTGCGACCGC AGGGCGGGGT CGGGGCGACG
CGGGTGCACG GCATCACGCG CGAGATGGTG GAGCCGGCGC CGCGCTTCGA GGACGTCGGC
ATGGAGCTGC ACGGGCTGCT CGTGGACCGG GTGGTCGTGG CGCACAATCT GGCGTTCGAC
GCCAAGTTCC TGGTGACACA GTTCGCGCGG CTCGGCGTGC ACTCCCCGGA GATCGCCGGC
GGCGCGTGCA CGCTGCGGAC CTCGCAGGCG ATGCTGCCAG GGCCTTCGTA CAAGCTGCTG
GACTGCTGTG AGGCGGTCGG GGTCGAGCTG ACCGACGCGC ACAGCGCCCT CGGCGACGCG
CTGGCGACGG CACGGCTACT CGGGTTCTTC CTGCAGCGCG GCGTCAACGT CGGCGGCATG
GCGGTGCGGC CGCAGGCGGC GGTGCCCCAG CCGCGAGCGG AGCTCGGTGA TCTGTTCCTG
TCCAGGTCAC GCTAG
 
Protein sequence
MSDLEDGLVN GYAVVDVETS GFQPPIAEIL EVAIVHVDAT GQVTGSWDSL LRPQGGVGAT 
RVHGITREMV EPAPRFEDVG MELHGLLVDR VVVAHNLAFD AKFLVTQFAR LGVHSPEIAG
GACTLRTSQA MLPGPSYKLL DCCEAVGVEL TDAHSALGDA LATARLLGFF LQRGVNVGGM
AVRPQAAVPQ PRAELGDLFL SRSR