Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0866 |
Symbol | |
ID | 8332196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1006366 |
End bp | 1006980 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954016 |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_003111640 |
Protein GI | 256390076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.183272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGACC TCGAAGATGG GTTGGTGAAC GGATACGCAG TCGTCGATGT CGAAACTTCC GGATTCCAGC CTCCGATCGC CGAGATCCTG GAAGTCGCGA TCGTGCATGT AGACGCCACC GGGCAGGTGA CGGGCAGTTG GGACAGTCTG CTGCGACCGC AGGGCGGGGT CGGGGCGACG CGGGTGCACG GCATCACGCG CGAGATGGTG GAGCCGGCGC CGCGCTTCGA GGACGTCGGC ATGGAGCTGC ACGGGCTGCT CGTGGACCGG GTGGTCGTGG CGCACAATCT GGCGTTCGAC GCCAAGTTCC TGGTGACACA GTTCGCGCGG CTCGGCGTGC ACTCCCCGGA GATCGCCGGC GGCGCGTGCA CGCTGCGGAC CTCGCAGGCG ATGCTGCCAG GGCCTTCGTA CAAGCTGCTG GACTGCTGTG AGGCGGTCGG GGTCGAGCTG ACCGACGCGC ACAGCGCCCT CGGCGACGCG CTGGCGACGG CACGGCTACT CGGGTTCTTC CTGCAGCGCG GCGTCAACGT CGGCGGCATG GCGGTGCGGC CGCAGGCGGC GGTGCCCCAG CCGCGAGCGG AGCTCGGTGA TCTGTTCCTG TCCAGGTCAC GCTAG
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Protein sequence | MSDLEDGLVN GYAVVDVETS GFQPPIAEIL EVAIVHVDAT GQVTGSWDSL LRPQGGVGAT RVHGITREMV EPAPRFEDVG MELHGLLVDR VVVAHNLAFD AKFLVTQFAR LGVHSPEIAG GACTLRTSQA MLPGPSYKLL DCCEAVGVEL TDAHSALGDA LATARLLGFF LQRGVNVGGM AVRPQAAVPQ PRAELGDLFL SRSR
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