| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0859 |
|---|
| Symbol | |
|---|
| ID | 8332189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 995572 |
|---|
| End bp | 997155 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644954009 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_003111633 |
|---|
| Protein GI | 256390069 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.444174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00751503 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGTC GCTTCGTCCG ACGCTCCATC TGGGCCGCGT CTTTGGCCTC CGCCACGTTC
ATAGCAGTGT CCCAGGGTGC TGCTTCGGAG ACGGCACCAC CGACCTCGAC CCCGGTTCCG
GTCTCCCAGC ACATAGCGCA CCACCTGGCG ATGCACACGA ACCACGTCCA GCTGACCGAC
GGCGACAGCA GCTATATCGG TCCCGCGGCG TGCTCCGGCT ACTACGGCGA GCACACCGCC
AAGGCCGTCC CGAACGCGTT CGGCGGCCGC AATCCCTTAG CCGTCTGCGG CTACACCCCC
GAACAGCTTC GCTTCGCCTA CGGCGTCACG CAGTCCCACG AGCGCGGCGA AGGCGTCACC
GTCGCGATCG TCGACGCGTA CGCCTCCCCC ACGATGCTCG CCGACGCGAA CCACTATGCG
ATGCACCACG ACGAGCGCCC GCTGAGCCCG AGCCAGTATC GGGAGGTCAC TCCCCCGGCG
TACCACCACC TGACGGACGG CGAGTGCGAG ACGCCGTCGT CGTGGGCGGT CGAGGAAGCG
CTGGATGTGG AGGCCGTGCA CGCCATGGCT CCGCAGGCGA ACATCGTCTA CGTCGCCGCC
GCGTCCTGTG ACGACACCGA TCTGATGGCG GCGTTGCAGT CGGTGGTCGA CAACCACCTC
GCGACGATCG TCTCCGACTC CTGGGGCGGC ATCGCGCACA GCACCTATGG CGATGAGGAT
CCCTCGACGA TGGCAGGGTA TTCGGCCTTG TTCCAACGAG GAGGGCAGCA GGGGATCAGC
TTCCTGTTCT CGTCCGGGGA CTGCGGCGCC GAGGTTCCGT CGGCGCAGTG CGCGACCGGT
TCGGCGCGGC CGCAGGCGGA GTATCCGGCT GAGGATCCGT GGGTGACGGC GGTCGGCGGG
ACGAGCTTGG CGATCGGGTC GTGGGACCAG TACGTCGGGG AGGTCGGCTG GGGCGACCGG
CGCTCGTCGC TGGCACCGGG CGGGAGCGCG TGGTCGCCGG CGGCGGGAAC CGGCGAGTGG
CGGTTCGGGG GTGGGGGCGG GACGAGCGAA GACGTTGCGC AGCCTGGCTA TCAGGCCGGG
GTCGTACCTC CAGCGTTGGC TTCGACACTG CTGAACGGCA AGACGGCGGG ACAGCCGATG
CGGGTGGTGC CGGACGTGGC GATGGACGCC GATCCGATGA CCGGTTTCAT GGTCGGGGTC
ACGCAGAAGC TGCCGAACGG CTCCACCGGG TACGCGGAGT CCACGATCGG CGGCACGTCG
CTGGCCACTC CGCTGTTCGC CGGGCTGACG GCCGACGCCG AGCAGGCCGC GGGTCATCCA
TTCGGCTTCC TGAACCCGGC GCTGTACGGA AGGGCGGCCT CGGGGGTGTT CCACGACGTC
AGCCAGACCT CGCTCGGCAA GGACTGCCCG CGGCCCGGGA TGCCGCCGGC CACCGTCGTC
GACCTGGGCG TCGACGGTGC CGGAGTGCAT CAGGCGCGGC TGTACCAGCT GGGGGACGAC
GGACTACTTT CCTCCGGTGT CGGCTATGAC GATGTGACCG GCTTGGGTTC GCCTTCTCTG
TCCTACTTGC GCTCGTGGAA GTGA
|
|---|
| Protein sequence | MFGRFVRRSI WAASLASATF IAVSQGAASE TAPPTSTPVP VSQHIAHHLA MHTNHVQLTD
GDSSYIGPAA CSGYYGEHTA KAVPNAFGGR NPLAVCGYTP EQLRFAYGVT QSHERGEGVT
VAIVDAYASP TMLADANHYA MHHDERPLSP SQYREVTPPA YHHLTDGECE TPSSWAVEEA
LDVEAVHAMA PQANIVYVAA ASCDDTDLMA ALQSVVDNHL ATIVSDSWGG IAHSTYGDED
PSTMAGYSAL FQRGGQQGIS FLFSSGDCGA EVPSAQCATG SARPQAEYPA EDPWVTAVGG
TSLAIGSWDQ YVGEVGWGDR RSSLAPGGSA WSPAAGTGEW RFGGGGGTSE DVAQPGYQAG
VVPPALASTL LNGKTAGQPM RVVPDVAMDA DPMTGFMVGV TQKLPNGSTG YAESTIGGTS
LATPLFAGLT ADAEQAAGHP FGFLNPALYG RAASGVFHDV SQTSLGKDCP RPGMPPATVV
DLGVDGAGVH QARLYQLGDD GLLSSGVGYD DVTGLGSPSL SYLRSWK
|
|---|
| |