| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0852 |
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| Symbol | |
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| ID | 8332182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 986220 |
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| End bp | 988409 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954002 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_003111626 |
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| Protein GI | 256390062 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.65019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000028489 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCC TCGCCCTCTG GATCCCCCTG CTCCCCCTGC TCTCCGCCGC GGCCCTCGCG
GCGGTCTCGC TGTCCGGCCG CGCCCGCGCG ACCGTCCCGG CCCTGGCCGT CCTCCCGATC
GCCGCCGCGG CCGTCCTCAC CCTCGTCGTC CTGTTCGGCC ACGGGACCTC CGCCGCCACC
GAGTCCCGCA TCCGCTACGC CGCGACCGGC GGACCCGAGC TCTGGCTCGG CGCCCGCGTC
GACGGCCTGG CGGCCCTGAT CGCGGTCCTG GTCGGCGTCG TCGCCACCGC GGTCCAGCTC
TACTCGGTCA GCTACATGGC CCACGAGGAG CGCTACACCT CCTACTCCGC CCTGATCTCG
CTGTTCACGG CGGCGATGCT GGTCGTCGTC TACTCCACCG ACCTGCTCGT CCTGCTCGTC
GGCTGGGAGG TCATGGGCGC CTGCTCCTAC TTCCTCATCG GTCACCACTG GGACCGCCCC
GAAGCCCGCA GCGCCAGCAT CAAAGCGTTC CTGGTCACCA AGCTCGGCGA CGCCCCCTTC
CTGCTGGGCA TCCTGTTCCT GGCGCACGGC GCGGGCACCT TCCGCGTCCA GCCGATCCTC
CAACACGCGA TCGCCCAAGG CGGCCACGGC TACACCGCCG CCGGCGCGAT CCTGCTGATC
GGCGGCGTGA TGGGCAAGAG CGCCCAGATC CCGCTCCAGA CCTGGCTCCC GGACGCGATG
GCCGGCCCGA CCCCCATCAG TGCCCTGATC CACGCCGCGA CCATGGTCGC CGCCGGCGTC
TACGTCGTCG CGCGCCTCTA CCCGGTGTTC CTGGTGACGC CGGCCGCCTT GTGGATCCTC
GCGATCGCCG CCGCCCTCAC CGCCGTGACC GCCGCACTGT CGGCGTTCGC CCAACGCGAC
CTCAAGCGCA TCCTCGCCTA CTCCACAGTC AGCCAACTCG CGCTGATGGT CGCGGCGCTC
GCCGCCGGCG GCCGGGACGC GGCGGTCTTC CACCTGATGT CCCACGGCGG ATTCAAAGCC
CTGCTGTTCC TCGGCGCCGG CGTGATCATC CACAAGGCCG GAACCGGCGA CGTCGACGAG
CTCAACACCC AAGCCCTGCA CCGCAAACTC CCGGTCACGT TCATCACCAT GACGATCGGT
CTGGCGGCGC TGGCCGGTGT CCCGCCCTTC TCAGGGTTCT TCTCCAAGGA GTCGATCGCC
GGCGTGGCCT TCGACACCGC GACGCATACC GGCCCGACGA AATCCCTGCT CGGCATCACG
CCGCCAGCAG GTATCGGCTG GCTGGTCTTC GTCGCCACCC TCCTGACCGG TTTCCTCACC
GCCGCCTACG CTCTGCGCAC CTGGCTGATG CTCTTCGGAC CGCTGGAACG CGGCCGGTTC
CGCTCGGCCG TGGAGATGTC GCAGCGCCAG CCGCAGACGG CGCCCCAGAC CCCGGCGCCC
TCGAGCGAAC CCGAGACCGA GACCCCGACC GCCGCCGAGG TCGCCGCAGC CAGCGAATGG
GCTCTGGAGG CGCTCGTCGC GGAATCGATC CGCGAGGAAG CCGCGACGAC TGCGACGACT
GCGACGGCCG AGACGACCGG GGCGACCGCC GCCGCCGAAA AGGTTGCGCC GAAAGCGAAA
ACCGGTCCCG AGGCACCACG CGCCGAACTC CTCCCTCTGG TCGTCCTGGC AGCGATCACC
ACCGTGTTCG GCTTCGTCGG TTTGAACCGC GGGTGGTTCC CGTCATGGCT CGGCGACGCC
GACGGCAACG CCTACTGCGC CTCGGCAGCC AGCGCCGGCA AGCTGATCCA GCCCGCCGAC
GCCTACCACC TGGCGCCCGC GCTGCTCTCA ACGATCTTGG CGTTGGTCGC CCTGGCGCTT
GGTCTCGGAG TGGTCTTCGC AGCCGCCCGC GCCAAGCCGG GCACGGATCC CAACCACGTC
CTCGGCTTCC TGCGCAAACC AGCCTTCCTC GGCTTCCGCG CCGACGACCT CCAGGACGCC
GTCGCCGTCC GTCCGGTGCA AGCCGCCGCG GACGCCGTCG CCTTCCTCGA CACCGAAGTC
GTGGACGCCT ACGTCCGGGG GAGCGGGCAC GCGGCCCGGC TGCTCGGCGA GGGTCTGCGG
CGCGTCCAGA CCGGCAACGT CCAGCTCTAC CTGACCGGGG TGCTGACCGG AGTCGTCGTC
ATCGCCGCCG TCCTCGGATT CGGAAGGTAG
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| Protein sequence | MSTLALWIPL LPLLSAAALA AVSLSGRARA TVPALAVLPI AAAAVLTLVV LFGHGTSAAT
ESRIRYAATG GPELWLGARV DGLAALIAVL VGVVATAVQL YSVSYMAHEE RYTSYSALIS
LFTAAMLVVV YSTDLLVLLV GWEVMGACSY FLIGHHWDRP EARSASIKAF LVTKLGDAPF
LLGILFLAHG AGTFRVQPIL QHAIAQGGHG YTAAGAILLI GGVMGKSAQI PLQTWLPDAM
AGPTPISALI HAATMVAAGV YVVARLYPVF LVTPAALWIL AIAAALTAVT AALSAFAQRD
LKRILAYSTV SQLALMVAAL AAGGRDAAVF HLMSHGGFKA LLFLGAGVII HKAGTGDVDE
LNTQALHRKL PVTFITMTIG LAALAGVPPF SGFFSKESIA GVAFDTATHT GPTKSLLGIT
PPAGIGWLVF VATLLTGFLT AAYALRTWLM LFGPLERGRF RSAVEMSQRQ PQTAPQTPAP
SSEPETETPT AAEVAAASEW ALEALVAESI REEAATTATT ATAETTGATA AAEKVAPKAK
TGPEAPRAEL LPLVVLAAIT TVFGFVGLNR GWFPSWLGDA DGNAYCASAA SAGKLIQPAD
AYHLAPALLS TILALVALAL GLGVVFAAAR AKPGTDPNHV LGFLRKPAFL GFRADDLQDA
VAVRPVQAAA DAVAFLDTEV VDAYVRGSGH AARLLGEGLR RVQTGNVQLY LTGVLTGVVV
IAAVLGFGR
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