Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0816 |
Symbol | |
ID | 8332146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 949726 |
End bp | 950640 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953968 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_003111592 |
Protein GI | 256390028 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.722196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TGCCGACAGC GTTGTCGCTC CGGGAAGTAG GGCCGCGCGA CGGCCTGCAG AACGAGGACC CGGTCTCCAC CGAAACCAAG ATCGAACTCA TCGACCGGCT GTCCGGGACC GGCGTGTCGC GCATCGAGGC GGTGTCGTTC GTGCACCCCC GCGCGATCCC GCAGATGGCC GACGCCGCCG AGGTCGCCGC GCAGATGACG CGCGCTTCCG GCGTGCGCTA CTCGGCGCTG GTGCCGAATT TCAAGGGCGC CGAGCGGGCT CTGGACGCCG GCTTCAATGA GATCGAGGTG GTCGTCTCCG CCTCAGACAC GCATAACAAG AAGAACCTGA ACCGCAGCAC GGCCGAGTCC CTGGACGACA TCGCCGCGAT CATCGACCTG GCCCACGGCC GGGGCGCGAC GGTCCAGGTC ATCGTGTCCA CGGCGTGGGG CTGCCCGTAC GAGGGCGAGG TCCCGACCGA GCGCGTGATG TGGGTGGTGA ACACCGCCGC CGCGCATGGC GCCGACTCGC TGTCCTTCGG CGACACCACC GGCATGGCCA CCCCGACCCG GGTGACCAGG CTGATCGGCG AGACCCGCTC GGCGCACGCC GACAAGCCGC TGAACCTGCA CTTCCACAAC ACGCGCGGCA CCGGCCTGGC GAACGTCCTG GCGGCGCTGC AGCTGGGCGT CACCGACTTC GACGCCTCCG TCGGCGGCCT CGGCGGCTGC CCCTACGCTC CCGGCGCCTC CGGCAACATC GCCACCGAGG AGCTGGTGCA CATGGTCGAG GACATGGGCA TCGACACCGG CGTGAACCTG GATGCCTTGC TGGACACCGC GGCGTACGCC GAGCGCGCGG TCGGGCGGAC GCTGCCGTCG CAGGTACTGC GGGCCGGACC GCGGACGCGG CTGGCGCAGA GCTAG
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Protein sequence | MTDMPTALSL REVGPRDGLQ NEDPVSTETK IELIDRLSGT GVSRIEAVSF VHPRAIPQMA DAAEVAAQMT RASGVRYSAL VPNFKGAERA LDAGFNEIEV VVSASDTHNK KNLNRSTAES LDDIAAIIDL AHGRGATVQV IVSTAWGCPY EGEVPTERVM WVVNTAAAHG ADSLSFGDTT GMATPTRVTR LIGETRSAHA DKPLNLHFHN TRGTGLANVL AALQLGVTDF DASVGGLGGC PYAPGASGNI ATEELVHMVE DMGIDTGVNL DALLDTAAYA ERAVGRTLPS QVLRAGPRTR LAQS
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