Gene Caci_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0816 
Symbol 
ID8332146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp949726 
End bp950640 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID644953968 
Productpyruvate carboxyltransferase 
Protein accessionYP_003111592 
Protein GI256390028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.722196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TGCCGACAGC GTTGTCGCTC CGGGAAGTAG GGCCGCGCGA CGGCCTGCAG 
AACGAGGACC CGGTCTCCAC CGAAACCAAG ATCGAACTCA TCGACCGGCT GTCCGGGACC
GGCGTGTCGC GCATCGAGGC GGTGTCGTTC GTGCACCCCC GCGCGATCCC GCAGATGGCC
GACGCCGCCG AGGTCGCCGC GCAGATGACG CGCGCTTCCG GCGTGCGCTA CTCGGCGCTG
GTGCCGAATT TCAAGGGCGC CGAGCGGGCT CTGGACGCCG GCTTCAATGA GATCGAGGTG
GTCGTCTCCG CCTCAGACAC GCATAACAAG AAGAACCTGA ACCGCAGCAC GGCCGAGTCC
CTGGACGACA TCGCCGCGAT CATCGACCTG GCCCACGGCC GGGGCGCGAC GGTCCAGGTC
ATCGTGTCCA CGGCGTGGGG CTGCCCGTAC GAGGGCGAGG TCCCGACCGA GCGCGTGATG
TGGGTGGTGA ACACCGCCGC CGCGCATGGC GCCGACTCGC TGTCCTTCGG CGACACCACC
GGCATGGCCA CCCCGACCCG GGTGACCAGG CTGATCGGCG AGACCCGCTC GGCGCACGCC
GACAAGCCGC TGAACCTGCA CTTCCACAAC ACGCGCGGCA CCGGCCTGGC GAACGTCCTG
GCGGCGCTGC AGCTGGGCGT CACCGACTTC GACGCCTCCG TCGGCGGCCT CGGCGGCTGC
CCCTACGCTC CCGGCGCCTC CGGCAACATC GCCACCGAGG AGCTGGTGCA CATGGTCGAG
GACATGGGCA TCGACACCGG CGTGAACCTG GATGCCTTGC TGGACACCGC GGCGTACGCC
GAGCGCGCGG TCGGGCGGAC GCTGCCGTCG CAGGTACTGC GGGCCGGACC GCGGACGCGG
CTGGCGCAGA GCTAG
 
Protein sequence
MTDMPTALSL REVGPRDGLQ NEDPVSTETK IELIDRLSGT GVSRIEAVSF VHPRAIPQMA 
DAAEVAAQMT RASGVRYSAL VPNFKGAERA LDAGFNEIEV VVSASDTHNK KNLNRSTAES
LDDIAAIIDL AHGRGATVQV IVSTAWGCPY EGEVPTERVM WVVNTAAAHG ADSLSFGDTT
GMATPTRVTR LIGETRSAHA DKPLNLHFHN TRGTGLANVL AALQLGVTDF DASVGGLGGC
PYAPGASGNI ATEELVHMVE DMGIDTGVNL DALLDTAAYA ERAVGRTLPS QVLRAGPRTR
LAQS