Gene Caci_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0808 
Symbol 
ID8332138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp940583 
End bp942025 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content72% 
IMG OID644953960 
Producthypothetical protein 
Protein accessionYP_003111584 
Protein GI256390020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC TTCTTGCCCG CCGGGGAGGG AGGACGTTCG CGGTCCTCCT TGCGGGCTTC 
GCTGTCCTGT TTTCTCTGTT CGCCTTAGGC GGTGGTCCTG CCCGCGCCGA CTCGCCTTCG
ACGGTCGACT CGGTCGCGGC GGCACTCAAG GACAAGCCGG TCTACGTGGA TCCCGGCGCG
CCGGTACAGC TGACATCGGC GCAGGTCGAC GGGTTGGTAT CGCAGATCCA CGGGATGCAC
TCCGGAACGC AGGTCTTCAT CGCGGTCCTG CCGGACAATC CGACGTTCGA CCAGAGCACA
CTGCTTCAGC AGCTGCGGAA CAAGGTCGGG CAGCCGGGCG TCTACGCCGC GAGCGTCGGC
CGCGCCTTCC ACGCGCTGGA CTTCTCCGGC ACGCTGCGCA CCGGGCAGGC TGACGGACTG
GCCGTCGCCG CGGGGCAGGG CAGCGGCGGG AATCTGAACA CCCTGCTGAC CTCGTTCGTG
TCCTCCGTCG ACGCCGCGGT CACCGCCGAC GGCCACCCGA ACCCGAACGG AAGCTCCAGC
GGGAAGCCGT CCTCCTCGAA GTCCGGCAGC GGGGGCGCGA TCGTCGGCAT CCTGGTGCTG
GCGGCGATCG CCGGCGGCGG ATACCTGGCG ATCGCCGGGC GCAGGAAGCA GCGGGCGAAC
CGGCGGCGGG CCGCCGAACT CGCCGGGCTC AAGCGCGCCG TGGACGAGGA CATCACCGCC
TACGGCGAGG TGCTGGACCG GCTGGACTTC TCCCCCGGCG ACACCGCCGC GACCGACGAG
ATGCGCGCGG ACTACAGCAA GGCGCTGGAT CAGTACGAGG CGGCCAAGTC GGCGGCAGCG
GCGGCGCAGC GTCCGCAGGA CATGAAGAAC GTCACCGAGG CGCTGGACGA GGGCCGCTTC
GCCCTGGCGA CGCTGGACGC CCGCCGCAAG GGCACGCCGC TTCCGGAGCG GCGCCCGCCG
TGCTTCTTCG ACCCGCGCCA CGGACCGTCG GTCGGTGAGG TGACGTGGGC TCCGCCCGGC
GGCGCGCCGC GTCCGGTCCC GGCGTGCGCC GCGGACATGA CGCGCGTGGA TACCGGGCAT
GAGCCGCAGG TGCGGCAGGT GGATACGGCG TACGGTCCGC AGCCGTACTA CAACGCCGGT
CCCGTGTACG GGCCGTGGGC CGGCGGGTAC TTCGGCGGAT CGATCCTGCC GGCGCTGATG
ATCGGGACGC TGATGGGCTC GGCGTTCGGC GGCAACGAGA CCTACGTCGA GAACAACTAC
TACGACAACG GCGGCGGAGG CTGGGGCGAC GGCGGTCCCG GCGGCGACGG TGGTGGTGGC
GGCGGCGATG GCGGCGGCTC AGGCGATGGC GGCGGCTGGG GCGACTTCGG CGGCTCGTCC
GATTGGGGCG GCGGAGGCGA CAGCGGCGGC GGATCGGATT GGGGCGGCGG CTCTGATTGG
TAA
 
Protein sequence
MEHLLARRGG RTFAVLLAGF AVLFSLFALG GGPARADSPS TVDSVAAALK DKPVYVDPGA 
PVQLTSAQVD GLVSQIHGMH SGTQVFIAVL PDNPTFDQST LLQQLRNKVG QPGVYAASVG
RAFHALDFSG TLRTGQADGL AVAAGQGSGG NLNTLLTSFV SSVDAAVTAD GHPNPNGSSS
GKPSSSKSGS GGAIVGILVL AAIAGGGYLA IAGRRKQRAN RRRAAELAGL KRAVDEDITA
YGEVLDRLDF SPGDTAATDE MRADYSKALD QYEAAKSAAA AAQRPQDMKN VTEALDEGRF
ALATLDARRK GTPLPERRPP CFFDPRHGPS VGEVTWAPPG GAPRPVPACA ADMTRVDTGH
EPQVRQVDTA YGPQPYYNAG PVYGPWAGGY FGGSILPALM IGTLMGSAFG GNETYVENNY
YDNGGGGWGD GGPGGDGGGG GGDGGGSGDG GGWGDFGGSS DWGGGGDSGG GSDWGGGSDW