Gene Caci_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0792 
Symbol 
ID8332122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp923662 
End bp925179 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content71% 
IMG OID644953944 
Producthistidine kinase 
Protein accessionYP_003111568 
Protein GI256390004 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTAGGG AGAGACCGAA GAGCGCCAAG CTCGCGAAAG CACCGAAGGT GCAGGAGCTG 
CCCCGGCGCG CGGACCAAGA GCGCCGCAGG CACAAGCGGC CGCTGCGGCT GACCGGGCTG
CGGATGCGGC TGCTGGCGGC GTTCGCGGCG GTGGCGCTGA TGACGTCGGC GGCGGTGACC
GGGGTCTCCT ACGTGCTGAC CCGGCAGTCC CTGATGAACC GCGTCAACCA GAGCTCGGTG
CAGCAGTTCA AGGCCGCGGT CGCCCAAACC CGGGAATCGC TGCAGGAGGC GCGGCCCTCG
ACGACCCCGG TCGACCTGAG CACGATCGGC TTCAAACTCC TGGCCGCCAG CGGCACCGAC
TGGGTGCTGT ACCGCACCGG GATGAACTAC GGCACGACCG AGAACTACCT CAGCTACAAC
TCGATCCCGC CCAAGCTCCG CGTCGCGGCG CAGAAGAACA TAGCCTGGCA GCGGACCCGC
GTGGGCAACC AGCCGTACCT GATCGTCGGC AGCTCCGTGC AGCCGAACGG GATCGAGGTC
TACAACTTCG TCAGCCTGGA GTCGCAGCAG GAGGACCTCA ACCGGCTCGC CCAGAACTCC
GCCATCGCCG CCGCGATCGC GATAGCGATA TCGCTGCTGC TCGGCCTGCT CGCCTCCCGC
GGCGTCCTGC TTCCCTTGCG GCGCCTGGGG ATCGCCGCGC GGCGCCTCGG CGCCGGCAAG
CTGGACACCC GGGTGGAGGT GAAGGGTAAC GACGAGGTCG CCGACGTCTC GCGCACCTTC
AACGAGACCG CCGAGGCCCT GGAGCGCTCC ATCGCCGAAC TGCGCTCGCT GGAGGCGGCC
TCGCGGCGGT TCGTCGCCGA CGTCTCGCAC GAGCTGCGCA CGCCGCTGAC CGCGATGACC
GCCGTGAGCG ACATGCTCGA GGAGGCCACC GACGTCGGCG ACGAGAGCGC GCCGGCCGCG
CAGCTCATCG TCACCGAGAC CCGCCGGCTC GCCCGGCTCG TCGAGGACCT GATGGAGGTG
TCCCGCTTCG ACGCCGGCAC CGCGCAGCTG CGGCGCGAGG ACGTCGACCT GGTGGCGCTC
GTGCACGGCT GCCTGGACGC GCGCGGCTGG ACCGGGCGCG TCACCCTGAA CGTGCCGCCG
AGCCTGGCCG TCACCGTGGA CCAGCGCCGG ATCGACGTGA TCGTGGCGAA CATGGTCGGC
AACGCGATCA AGCACGGCGG GGAGGGACCC GTGGAGCTGT CCATCGGCGC CTTCGGGCCG
AACCTGGTCC TGCAGGTGCG CGACCACGGA CCGGGCATCC CCCCGGACGC CCTGGAGCAC
ATCTTCGAGC GCTTCTACAA GGCCGACAAG GCCCGCGTCC GCTCCGAGGG CAGCGGCCTG
GGACTGTCGA TCGCCTACGA GAACGCGCAC ATCCACGGCG GCGAGCTGGC CGGCGGCAAC
CATCCCGACG GCGGCGCCGT CTTCACCTTG CGGCTGCCGC TGCAGGCGAC CATCCCGGCC
CAGGAGGCGC AGGAATGA
 
Protein sequence
MLRERPKSAK LAKAPKVQEL PRRADQERRR HKRPLRLTGL RMRLLAAFAA VALMTSAAVT 
GVSYVLTRQS LMNRVNQSSV QQFKAAVAQT RESLQEARPS TTPVDLSTIG FKLLAASGTD
WVLYRTGMNY GTTENYLSYN SIPPKLRVAA QKNIAWQRTR VGNQPYLIVG SSVQPNGIEV
YNFVSLESQQ EDLNRLAQNS AIAAAIAIAI SLLLGLLASR GVLLPLRRLG IAARRLGAGK
LDTRVEVKGN DEVADVSRTF NETAEALERS IAELRSLEAA SRRFVADVSH ELRTPLTAMT
AVSDMLEEAT DVGDESAPAA QLIVTETRRL ARLVEDLMEV SRFDAGTAQL RREDVDLVAL
VHGCLDARGW TGRVTLNVPP SLAVTVDQRR IDVIVANMVG NAIKHGGEGP VELSIGAFGP
NLVLQVRDHG PGIPPDALEH IFERFYKADK ARVRSEGSGL GLSIAYENAH IHGGELAGGN
HPDGGAVFTL RLPLQATIPA QEAQE