Gene Caci_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0778 
Symbol 
ID8332108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp908579 
End bp910099 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content69% 
IMG OID644953930 
Producthypothetical protein 
Protein accessionYP_003111554 
Protein GI256389990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.944055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCACG ACAAGCTCCA CCATCGATCG GCGGCGTCAA TGGGTGTCAG CATGGGCTTC 
GGCAAGTACG GCCGGCGCGT CGCCGCCAAG GCCAAGCGCG AGGTCACCGG CATGTTCCGG
GCCAAGCCGT ACGACCCCGG GCACCCGGCT CCGCCCGCCC GCGACGTCGC CCCCGCCGAA
GGCGTCAGCG CCGCCGGGGA ACCGGTCTGG TCGCCCAAAT CCGGCGGCAC GTGCGCCAGC
AGCGACGTCG AAGGCCGCGT CCGCGTCTAC GCCTCGGCGA ACAGCGTGAA CCGCGGCAGC
GGCAGCGGCA ACGGCATCGA CTTCATGGTG TCGGTGAACC CGCCGCAGCC CTTCACCATC
GAGGTGTTCC GGGTCGGCGC CGAGGATGTC AGTGTCCTGA AGACCGATGC GCTCGACGGC
GTGACGCAGG AGTGGTCGGC GCTCGACCTG AGCACCCGCA CCATCACCTG TTCCTGGACG
CCGACGTGGC ATCTGGACGT GCCCGCCGAC TGGCGCAGCG GGATCCACGT CGCCAAGCTC
CGCACCGCGG ACGGTTTGCA GACGTGCGTC CCCTTTGTGG TCCGGGACGA TGCAGGGGAG
CACGACATCC TCGTCGCGCT GCCGTTCCCG ACGTACCAGG CGTACAACGA GTACCCCAAA
GACAAGAAGA CCGGCGCGAG CCTGTACTAC GCCTGGGAAG ACGGCAAGAT CTATACCGAG
GGCAAGGCCG CGACGAAGGT CAGCTTCGAC CGGCCGTACC ATGTCACCGG GCTGCCGGCG
AACTTCGATC TGGACACCGC CTTCGCCAAG TGGGTCGAGA TCTGGGCCGC CGCGCACGGC
AAGAGCGTCG GCTACGCGGA CAGCGCGGAT CTGCACGACG GGACCGTCGA CCCGACGCGT
CACAAAGCCC TGATCTTCCC CGGGCACGAC GAGTACTGGT CGGCGCAGAT GCGCGACGCG
CTCGACAAGG CGCTCGCCAA CGGCGCGCAC GTCGCGTTCC TCGCCGCGAA CAACGTGTAT
TGGCGCATCC GGCTGGAGGA CGGCGGACGG ACGGTCGTCT GCTACAAGAA CCGCCCCGAC
CCCGGCGCGG CCTCGGCGAA CGAGCGGACC GCGCAGTGGC GCCAGACCGG GCGTCCGGAG
CAGGAGGTGC TCGGCGCGCA GTACGTGTCG ACGCTGAAGG GCACCGCGCC GCTGGTCGTG
GACAACGCCG GCCACTGGTT CTGGGAGGGC ACCGGCGTGC GGAACGGGGA GCGGATCCCC
GAGCTGCTGT GGGGCGAATG CGACCAGGTG CAGCCGTGGG TTCAGAGCCC TGACGGCTTC
GAGATCCTCG CCGCCTCGCC GTACACCGGG CAGGGTCAGC CGCGGATGCA GCACAGCGTG
CTGCACCGCA CGCCGGCCGG CGGCCTGGTC TTCGACGGCG GGACCTTCCA CTGGTCGAAA
GGCTTGTCCA CGCACGGGAT CGCCGACTCG CGGATCCAGC GCGCGACGGC GAACCTGCTG
TCGCGGATGC TGGAGCAGTA G
 
Protein sequence
MFHDKLHHRS AASMGVSMGF GKYGRRVAAK AKREVTGMFR AKPYDPGHPA PPARDVAPAE 
GVSAAGEPVW SPKSGGTCAS SDVEGRVRVY ASANSVNRGS GSGNGIDFMV SVNPPQPFTI
EVFRVGAEDV SVLKTDALDG VTQEWSALDL STRTITCSWT PTWHLDVPAD WRSGIHVAKL
RTADGLQTCV PFVVRDDAGE HDILVALPFP TYQAYNEYPK DKKTGASLYY AWEDGKIYTE
GKAATKVSFD RPYHVTGLPA NFDLDTAFAK WVEIWAAAHG KSVGYADSAD LHDGTVDPTR
HKALIFPGHD EYWSAQMRDA LDKALANGAH VAFLAANNVY WRIRLEDGGR TVVCYKNRPD
PGAASANERT AQWRQTGRPE QEVLGAQYVS TLKGTAPLVV DNAGHWFWEG TGVRNGERIP
ELLWGECDQV QPWVQSPDGF EILAASPYTG QGQPRMQHSV LHRTPAGGLV FDGGTFHWSK
GLSTHGIADS RIQRATANLL SRMLEQ