| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0766 |
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| Symbol | |
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| ID | 8332096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 896125 |
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| End bp | 897624 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644953918 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003111542 |
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| Protein GI | 256389978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.176707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCATCCAGAC CGCGGCCGCC GACTCGGGCG CGGTCGCCGA CAAAGATCCC
AGGCGTTGGA AAGCCCTGAT CTTCATAGCC GTGGCCCAGC TGATGGTGGT CCTGGACGGC
ACGATCATGA ACATCGCTCT GCCGTCCGCC CAACGCTCCC TGGGCTTCTC CGACGGCAGC
CGGCAGTGGC TGATCACCGG CTACACCCTG GCGTTCGGCA GCCTGCTGTT GCTCGGCGGC
CGGATCGCCG ACTACACCGG CCGCAAGCGC GCCCTGCTGG TCGGTCTGAC CGGCTTCGCG
CTGGCCTCGG CGATCGGCGG CGTGGCTCCG GACTTCGCCG TGCTGCTCAT CGCGCGCTGT
CTGCAGGGGG CGTTCGGCGC GCTGCTCGCC CCGGCGGCGC TGTCGCTGCT GGCGACGACA
TTCACCGAGC CGCTGGAGCG CGCGAAGGCG TTCGGGCTGT TCGGCGGCGT CGCGGTCGGC
GGCAACGCGA TCGGGCTGCT GCTCGGCGGG CTGCTGACCG AGTACCTGAA CTGGCGGTTC
TGCCTGTACG TCAACATCCC GATCGCCGCG ATCGCGCTGG CCGGCGGGAT GAAGGAGATC
CGCGAGTCGC GCGCCGAGGG CCGTATGAAG CTGGACCTGC CCGGCGTGCT GCTGGTCGTC
GGCGGACTGG TCGCGATGGT CTACGGGCTC GGACAGGCCT CGACCGACGG CTGGGGGTCC
GCCACGGTCC TGGGCTGCCT GATCGGCGGC GCGGTGCTGC TGGCCGGGTT CCTGGTGGTG
GAGTCCCGGG TGGAGGCGCC GCTGCTGCCG CTGCGCGTGC TGCTGTCCCG GACCCGCGGC
GGGAGCTACC TCGCCGTCGG CACGGCTGCG GTGGGGATGT TCGCGCTCTT CCTGTTCCTG
ACGTACTACA TGCAGGACGT GAAGAAGTAC TCGGCGGTCA TGACCGGCGT CGCGTTCCTG
CCGATGACCG CGGCCATCAT GATCTCGGCG GTGCTGCTCG GCAGCCGGCT GGTGCCGAAG
GTGGCGCCGC GGCTGCTGAT GGTCCCCGGC ATGCTGGTCG CGGCCGGCGG GCTGGCGCTG
ATGACGACGG TGAAGCCGGA CACCGGCTAC GTGGCCGGCG TGCTGCCGGT CGAGGTCCTG
GTGGGCCTGG GGCTCGGACT GGTGATGGCG CCGGCGATGA ACTACGCCAC GCACAACGTG
CGTCCCGAGG ACGCCGGCGT CGCCTCGGCC ACGGTCAACA CCTCCCAGCA GGTGCTCGCC
TCGGTCGGGA TCGCGCTGTC CAACACCGTC GCGGCGAGCG CCACGACGTC GTACCTGAAG
TTGCACCGGC CGTCCCCGAC GCTGGTGAAC GACGCCGTGG TGCACGGGTT CACGACGGCG
TCGGGCGTCG CGGCGGCCAT CGTGCTGGGC GGCGCGGTGA TCGTCGCGCT GCTGATGAAC
ACCGGGAAGC CGGACCCGTC GCAGGCTTCT GCGGACGGTC CGGTGGCGGT GCACGTCTGA
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| Protein sequence | MTDTIQTAAA DSGAVADKDP RRWKALIFIA VAQLMVVLDG TIMNIALPSA QRSLGFSDGS
RQWLITGYTL AFGSLLLLGG RIADYTGRKR ALLVGLTGFA LASAIGGVAP DFAVLLIARC
LQGAFGALLA PAALSLLATT FTEPLERAKA FGLFGGVAVG GNAIGLLLGG LLTEYLNWRF
CLYVNIPIAA IALAGGMKEI RESRAEGRMK LDLPGVLLVV GGLVAMVYGL GQASTDGWGS
ATVLGCLIGG AVLLAGFLVV ESRVEAPLLP LRVLLSRTRG GSYLAVGTAA VGMFALFLFL
TYYMQDVKKY SAVMTGVAFL PMTAAIMISA VLLGSRLVPK VAPRLLMVPG MLVAAGGLAL
MTTVKPDTGY VAGVLPVEVL VGLGLGLVMA PAMNYATHNV RPEDAGVASA TVNTSQQVLA
SVGIALSNTV AASATTSYLK LHRPSPTLVN DAVVHGFTTA SGVAAAIVLG GAVIVALLMN
TGKPDPSQAS ADGPVAVHV
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