Gene Caci_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0762 
Symbol 
ID8332092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp892223 
End bp893536 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID644953914 
Producthistidine kinase 
Protein accessionYP_003111538 
Protein GI256389974 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.332583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGAGCG AGCGGTCGGC CGAGGGGCCG TCGACGGCGG CCGAGGAGGG GATGGCCGGC 
GCGGCGGAAA CGGCCGGCCG CTCCTCCGTG TTCGAGGAGC CGCCCCTGCT GATGGCCGCG
CCGCGCGTGG GGCAGCCGGG GCGGTTCAAG TGGCTGTTCG CCGCGGTCTG GCTGTTCTAC
CTGGTCGACC CGGTGACCAA GGCGGTCCAC TCCGACCACT CCTCCGCCTT CAAGCTGCTG
GTCTACAGCC TCGTCGCGGT GTTCGTGGTG CTGTACGGCT GGCTGGCGTT CTCGGTGTAT
CCCCGGTCCG GGCCGATCGG CGCGGTGAGC GACTCCCCGC CGGTGGTGCT GCCGATCCTG
GTGGCGATGG CGGTGGTCGC GTTCGTGACC AGCGTGGCGG TCTACCCGGA ACTGGCCGGG
ATGTGGGTCT ACGTCGGCGC CGGCGCCGGA CTCGGCCTGT CGATGGAGGA CAAGACCGCC
TACCGCGGCG TGATGGCCGC GCTGGCCCTG ATGACCGTCT GCGTCCTGTC TTCCGGCGCC
CTGCGCTCGA TCTCCACCTG GCTCATCCTG GCCTTCCCGA TCTTCTTCGC CGGCATGTCC
ACCCTCGGCA TCCGCCAGAT GGCGCTGCTC ATCGGCCAAC TCCGCGAAGC CCGCACCCAA
GTCGCCCACC TGGCGACGAA CGAGGAGCGC CTCCGGCTGG CCCGCGACCT CCACGACCTG
ACCGGCCACT CCCTGGCGAC GATCACCCTG AAGGCGGAAC TGGCCCAGCG CATGCTCGCC
AAGGCCCGCG ACGCCGCCCC CGAAGGCCCG ACCCCGCGCC TGGACGCGGC ACTGAAAGAA
GTCCAGGAGA TCGAGCAGGT CTCGCGCCAG ACACTGACCG ACATCCGCCA GGCGGTGAGC
GGCTACCGCA GGGCGACACT CGCGGTCGAG GTGGCCTCGG CCCACGCCGC CCTGGACGCC
GCCGGCATCA AACTCGACGC CGCCCCCGAA GTGGCCGCCG CGACCGGCGA ATTCGACCCG
CAGAGCGAAG CCGCCCTCGC CTGGAGCCTG CGAGAGGCGG TGACGAACGC GATCCGCCAC
AGCGGCGCCG CCCGCGTCGA GATCACCCTG CTCCCCATCG GCGAGGAGAT GGTCCTGACG
GTCCGCAACG ACGGATACGG CCTGGCCGCC ACGGTCGGCG GCACCGACGA GTGCGGCGGC
CACGGCCTGA CCGGCCTGCG CGAGCGGCTG GACGCGGTCG GGGGACGGCT GTCGGTGGGC
GGGAACGATG GGGACTTCCG GTTGGTGGCG GCGGTTCCGG TGGTGGGGAG TTGA
 
Protein sequence
MWSERSAEGP STAAEEGMAG AAETAGRSSV FEEPPLLMAA PRVGQPGRFK WLFAAVWLFY 
LVDPVTKAVH SDHSSAFKLL VYSLVAVFVV LYGWLAFSVY PRSGPIGAVS DSPPVVLPIL
VAMAVVAFVT SVAVYPELAG MWVYVGAGAG LGLSMEDKTA YRGVMAALAL MTVCVLSSGA
LRSISTWLIL AFPIFFAGMS TLGIRQMALL IGQLREARTQ VAHLATNEER LRLARDLHDL
TGHSLATITL KAELAQRMLA KARDAAPEGP TPRLDAALKE VQEIEQVSRQ TLTDIRQAVS
GYRRATLAVE VASAHAALDA AGIKLDAAPE VAAATGEFDP QSEAALAWSL REAVTNAIRH
SGAARVEITL LPIGEEMVLT VRNDGYGLAA TVGGTDECGG HGLTGLRERL DAVGGRLSVG
GNDGDFRLVA AVPVVGS