| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0758 |
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| Symbol | |
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| ID | 8332088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 884565 |
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| End bp | 888632 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644953910 |
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| Product | VanW family protein |
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| Protein accession | YP_003111534 |
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| Protein GI | 256389970 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.115824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGACG AGTTTCCCCG ACGCCAGGCA GACGACGCTG ATCCGGACCG GCAGCCCGAC
TACGGGTTCG GCGGCGCGCC GCTGTTCCGC GACGAGGTGC CGCCGGCCGG CGGGCCCGCG
TTCGGCGCGG GCCCGGGCGC GGTCGGCAAC CCCGGCGCCA CCGGGTTCCA CGACGCGTCG
GCCTTCCGCG ACCCCGCGCC GGGGTACGGC GGCGCGGCGC CGTGGGGCGA CCAGGACGGC
GGTCGGGGCG GGTCCGGTCT CCCGGCGGGC GCCGGCGGTG CGTCCGGCGA TGGGCGCGGC
GATGTGCGCG GGCTCGACTA CGGCGCGGGC GGCGACTACG GGACCGGGCT CATGTCCGGC
TTCGACGGCG GCGCCGACAC CCTGAGCAGT TCCGGCGGTT TCCCGGCGCA GCGCTTCGCC
GGTCCGCGCA ACATGGCCGA GACCTCCGGC GCGGGCGCCG GTCCCGGATA CGGCGGCGCG
CGGCCCGGCG CGGCGCCGGT TCCTCGTCCC GCTCCCGGCG CGCCGTCCCC GGATGCCTTT
TCGCACCCCG CACCGAACGC GTTCAGCGGC GGCGCGGCGG CTGCCGGCGG GGAACCGGAG
TTCGGACCCA GTGAAGGTCC GCTGCGCGTG GTGCCCGCCG ACCAGGCCAG TGCGCTGCTG
CGGATCAAGC TGCCGGAGAA CCCGCCGGTC CCGTCGACCA CGTTGCGCGG CGACGCCCCG
ATCGAGGACG TCGTCGAGGC CTCGCAGATG CTGCACCGGG TGAGCCCGGC GAAGCCGAAC
GCGCTGCCCG GCGACGTGCT GGCGCTCACC ACCGCGACGA TGGTCGTGCC GATGCCCGGC
GCGGCGTTCG GCGGCGTGCG CGCCGTCCAG CGCCCGGCGC GGCTCACCGC GTCGGTGCCG
CCGGACCTGG CCAGCCGGGC CGAGGCGGAT CTGCTGTCGG ACACCGTCGA GCAGTTCTTC
GGGGACTTCG ACGCCATCGG GCGCGAGTTG CAGGCGCAGC GCGCGAGCGG TGCGGCCGCT
GCCGGCGCCG CTGCTGGCGC CGGAGCCGGC GTCGGTGTCA GCGCTGTGCC CGGCGCGGCA
GCGGTTCCCA CGGTACCCGC GCAAGGCGGC GAGAACGCCG GCGCCGAGCC TTCGCAGCCT
GCGACGCTGC CCGGGCAGTA CGCGCCCACC GGCGCGCCGC TCGCGGGCCG CTACGGCGTG
CCGACGCAGG TTCCCGGCTA CGACGCCGCG CGGCGCAGTC CGGTCGGCAT GCGTTATCTC
GGCGGCATCT TCCACGACTC CTCCGGCGAG TCATCGTTCT ACGACCCGTC GACCGAATCG
CTGGTGCCGA TGGGTGCCGC CGCGATCTCG GCGTCGGACT TCCGGCGGAC CGTGCCGGCG
ATCACGCGGC CGGTGCCGCC GCCGCGGACC GGTCCGCGTA CGGCGCAGCC GCCGCGCGAG
AGCACGGATT TCAAGGCAGG CTCGGCGCGT TCGGCCGGTG CGGCTGGCAC GACCGGCGCG
GTGCGTTCGA CCGGTGCGGC TGCGGCGGCG GCTGCTTCGG CGGGCGCGGC ACCGGTCGGC
GCCGGACCGC GGACCCCGAC GGTGCCCGCC CCGACGCGAG GCGGCGGCCG TACCTCCGGC
CGCACCGGAT TTCCCGCCGG GGGCAACGGC TCCGACAGCT CCGACGACAC CAAGGTCCTG
CCCACCGGGC ACTGGTCGGA CCATCACCCC GACCACCACC GCTCGCGGCG CACCAGCCGG
CGCGGCCGGG TGGCACTGGT CTCGGCGCTG TCGGTCACCT TGGCATTTGG CACGCTATAC
GGCGCCGCGC TCGCCTTCGA GGGACAGGTG CCCAAGGGCA CGCTCGTCGA CGGCGTCGCG
ATCGGCGGCA TGACGAAAAC GGCTGCGGTG GCGAAGTTGT CCGCCGCGCT TTCCCCGACG
CTGAGCGCGC CGCTGCGGCT GACCGCCGAC GGCGCCGCGT TCCAGCTCTC GCCGGAGCAA
GCCGGTCTGC ACATCGACTA CGCCGGGACG GTCGCGGCGG CGGCGGCGAG CCGCACCGAT
CCGACGGTCG CCATCCCGGC GCTCGCCGGG ACCGGCCGCG ATGTGCGATT ACAGGTGAGC
GTCGACCGCA CTGCCTTGAA GGCGGCGCTG ACGAGCCTCA CCGCCGGATT CGACAAGCCG
ATGGTGGACG GGAGCGTGAT CTTCCCCGGC GGCGTGCCGA CCCCGATCGC GCCGCGTCCG
GGGCGCGAGA TCGACGTCGA CGCAGCGGCC GGCGCGGTGG TCTCGGCGTT CGACGACGGC
GTCGCGGCGG TACGTGTGGC GGCGATGTCG CCTGCCGGGA CTCTGCCGAC GGCTCCGGCC
GCCTACGCGA TCGCTCCGGC GAAGACGGCG CTTTCCCCTG CGCACCACAC GAGTTCGGCG
CACACGAAAC AGCCTTCTGC GACACCGTCA ACGCCCTCTG CGACGCCGTC CGCGACGGAT
TCCCCCAGCG GGAAGGCCGG TATGCCCTCT GCTCCGGCGA GTACCGCGCC GTCCGCGCCG
GTCCCGTCCG GCACGGCGCC CGCGGTCGCT CCCGTTCCGG CTCCGGCGTT GGTGCCCGCT
CCCGGCGGCG TCCCGGCCAC GGCATCCACC GCCGGCGGTT CCTTCCCCGC CGCGCCGATC
GCGCTCACCG TGCAGAACGT CCAGCCGACC GTCACCCCGG CTGCTGTCGC GCAGGCGATG
CAGGACTTCG CACGGCCGGC GATGTCAGCT CCGGTCGCGC TGGTCACCGG CAGCGTGCGC
ACCGTCCTGA AGCCCGCGAT TCTGGGGCGC CATCTGGCGA TCGAGCCGGA CGGGCACGGC
GGTCTGGCGC CCAAGCTGGA CGGCGCCGGG ATCCGCGCCG AACTCGACCA CGACGCGCTG
GCCAAGTTGG AGCAGCCGCC GACCGACGCC TCGTTCACCG TCTCCGGCGG CAAGCCGGTG
CTGGTGCCGG GCAAGAACGG CGTGGGCTAC TCGCCGGAGG CGATCCAGAA CGCGGTGCTG
CCGGTACTGG CGAAGACCTC GTCGACGCAG CGCGTGGTGA CCGTGCCGAT CGGTCCGCTG
CCTCCGGCGC TGACCACCGA AGCCGCGCAG GCGCTCGGGA TCGACGACGT GATGGGCCTG
TACACCGCGC CCTTCAGCGC GACGGCGCAG CGCACCGCGA ACGTGAAGCA CGCGGCGGAC
TTGGTGCGCG GCCAGATCGT GCAGCCGGGG CAGGTGTTCA GCCTGAACCA GGTTCTCGGC
GCGCGTTCGA CCGCCAACGG TTTCATCCCG GCGTCCGCCT CCGGTCAGTC GGGGTCATCC
TCGACTTCTT CGTCCTCCTC GTCCTCTTCG TCCTCCGCTT CGGCCTCTGC ACAGGACGCC
GGCGCGGGCA CATCGCTGGT CGCCACCGCG CTGTTCAACG CCGAATACCT GGCCGGGCTC
AAGGACATGG AGCACCACCC GCACGCGACG GTGACCGACC ACTACCCGCC CGGGCTGGAG
GCGGCGGTGG TGTACCCCGA GGTGGATCTG AAGTTCCAGA ACGATTCCGG CGCTCCTGTC
TACCTCTGGA CCAGCGCCAC CGACAACGCG GTGACCGTCG CGGTGCTCGG GCAGAAGGCG
TGGGACTCGG TGCGGAGCGA GACCTCGCCG CACTACGCGT TGGTGCAGCC GAAGACCACG
TACTCCATGG CTGGCTCCTG CGTCGCCAAC GACGGCGTCC CGGGCTTCCA GGTGGACGTC
ACCCGCACCC TCACCAAGGC CGGGCAGGAC CCGGTGCGCG AGGTCTTCCA CAGCTCGTAT
GCCGCGCAGG ACAAGGTGGT CTGCGGTCAG ACCGGTCCCG GCAGCGGGCC GTCGGCGGCG
GGCGGTGCCG CCGGCGCTCC CACCGGTTCG CCGACCGGCG GGGCGGCCGC GTCGCAGTAC
CCTCCCACCG CGACGCAGGG CGCCACGACC AGCGGTCCGA ACGCGCCGAG CGGGACCGGG
ACGCCCGGCG GGGGCGCCTC GTCCGGAACG CCGGACGGCA CGCCGACGAG CGGCTCGGAC
GGGTCGCTGT TGGGCGGATT GCTGGGCGGA CCGCCGTCCC GGCACTGA
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| Protein sequence | MNDEFPRRQA DDADPDRQPD YGFGGAPLFR DEVPPAGGPA FGAGPGAVGN PGATGFHDAS
AFRDPAPGYG GAAPWGDQDG GRGGSGLPAG AGGASGDGRG DVRGLDYGAG GDYGTGLMSG
FDGGADTLSS SGGFPAQRFA GPRNMAETSG AGAGPGYGGA RPGAAPVPRP APGAPSPDAF
SHPAPNAFSG GAAAAGGEPE FGPSEGPLRV VPADQASALL RIKLPENPPV PSTTLRGDAP
IEDVVEASQM LHRVSPAKPN ALPGDVLALT TATMVVPMPG AAFGGVRAVQ RPARLTASVP
PDLASRAEAD LLSDTVEQFF GDFDAIGREL QAQRASGAAA AGAAAGAGAG VGVSAVPGAA
AVPTVPAQGG ENAGAEPSQP ATLPGQYAPT GAPLAGRYGV PTQVPGYDAA RRSPVGMRYL
GGIFHDSSGE SSFYDPSTES LVPMGAAAIS ASDFRRTVPA ITRPVPPPRT GPRTAQPPRE
STDFKAGSAR SAGAAGTTGA VRSTGAAAAA AASAGAAPVG AGPRTPTVPA PTRGGGRTSG
RTGFPAGGNG SDSSDDTKVL PTGHWSDHHP DHHRSRRTSR RGRVALVSAL SVTLAFGTLY
GAALAFEGQV PKGTLVDGVA IGGMTKTAAV AKLSAALSPT LSAPLRLTAD GAAFQLSPEQ
AGLHIDYAGT VAAAAASRTD PTVAIPALAG TGRDVRLQVS VDRTALKAAL TSLTAGFDKP
MVDGSVIFPG GVPTPIAPRP GREIDVDAAA GAVVSAFDDG VAAVRVAAMS PAGTLPTAPA
AYAIAPAKTA LSPAHHTSSA HTKQPSATPS TPSATPSATD SPSGKAGMPS APASTAPSAP
VPSGTAPAVA PVPAPALVPA PGGVPATAST AGGSFPAAPI ALTVQNVQPT VTPAAVAQAM
QDFARPAMSA PVALVTGSVR TVLKPAILGR HLAIEPDGHG GLAPKLDGAG IRAELDHDAL
AKLEQPPTDA SFTVSGGKPV LVPGKNGVGY SPEAIQNAVL PVLAKTSSTQ RVVTVPIGPL
PPALTTEAAQ ALGIDDVMGL YTAPFSATAQ RTANVKHAAD LVRGQIVQPG QVFSLNQVLG
ARSTANGFIP ASASGQSGSS STSSSSSSSS SSASASAQDA GAGTSLVATA LFNAEYLAGL
KDMEHHPHAT VTDHYPPGLE AAVVYPEVDL KFQNDSGAPV YLWTSATDNA VTVAVLGQKA
WDSVRSETSP HYALVQPKTT YSMAGSCVAN DGVPGFQVDV TRTLTKAGQD PVREVFHSSY
AAQDKVVCGQ TGPGSGPSAA GGAAGAPTGS PTGGAAASQY PPTATQGATT SGPNAPSGTG
TPGGGASSGT PDGTPTSGSD GSLLGGLLGG PPSRH
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