Gene Caci_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0756 
Symbol 
ID8332086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp882744 
End bp883715 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content71% 
IMG OID644953908 
Product1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase 
Protein accessionYP_003111532 
Protein GI256389968 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID[TIGR03445] 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.717354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CCACGACCGC GCAGCCGTCG GGCCCGGTGC CCCCGGCCAG CCCCACGGCC 
GCCCGGCGGC TGCTGCTCGT CCACGCCCAC CCGGACGACG AGGTGATCAC CACCGGCGCC
ACGATGGCCG CCTACGCCGC CGAGGGCGCG CACGTCACGC TGGTCACCTG CACCGCCGGC
GAGGAGGGCG AGGTGCTGGT TCCCGAGCTC GCGCACCTGG CCGCCGACCG CGAGGACCGG
CTCGCCGAGA TCCGGGTGGT GGAGCTGGCG AACGCGATGA CCGCGCTCGG TGTCGCCGAC
CACCGGTTCC TGGGCGGCGT GGGCTGCTAC CGGGACTCCG GGATGATGGG CACGCCCGCG
AACGACAAGC CGCACGCGTT CTGGCGCGCC GACCTCGACG AGGCCGCCGC GCACCTGGTG
AAGGTGGTCC GCGAGATCCG CCCGCAGGTG CTGGTCACCT ACGACGAGAA CGGCGGCTAC
GGGCATCCCG ACCACATCCA GGCGCACCGG GTCGCGATGC GCGCCGCTGA GCTGGCCGCC
GATCCGGCCT TCGCGCCCGA GCACGGCGCG GTCTGGGACG TGGCGAAGAT CTACTGGACC
GCGATGCCCG AATCGGTGCT CGCCGAGGGT ATCCAGGCGT TGAAGGAAGC CGGCGACACC
AGCGGATTCA TCGCGGTGGA GTCGGTGGAG GACCTGTCCT TCGGGACCGA CGACGCGCTG
GTGACCACCA CCATCGACGG CACCGCGTAC ATGGAGAACA AGCGCGAGGG CATGCGCGCC
TACCCCACGC AGATCTCGAT GGGGCAGGGC TTCTTCGCGC TGTCGAACTC CATCGGCATG
GAGTTCATGG CGCACGAGTT CTACCAGCTG GTGAAGGGCG CCGCCGAGGG GTCGGACACC
GGGTTGGAGA AGGACCTGTT CGCCGGGCTC GGCATCGCGG ACGGGACCGC TGCCGGGGTT
TCCCAGGGCT GA
 
Protein sequence
MTATTTAQPS GPVPPASPTA ARRLLLVHAH PDDEVITTGA TMAAYAAEGA HVTLVTCTAG 
EEGEVLVPEL AHLAADREDR LAEIRVVELA NAMTALGVAD HRFLGGVGCY RDSGMMGTPA
NDKPHAFWRA DLDEAAAHLV KVVREIRPQV LVTYDENGGY GHPDHIQAHR VAMRAAELAA
DPAFAPEHGA VWDVAKIYWT AMPESVLAEG IQALKEAGDT SGFIAVESVE DLSFGTDDAL
VTTTIDGTAY MENKREGMRA YPTQISMGQG FFALSNSIGM EFMAHEFYQL VKGAAEGSDT
GLEKDLFAGL GIADGTAAGV SQG