| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0748 |
|---|
| Symbol | |
|---|
| ID | 8332078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 871229 |
|---|
| End bp | 872053 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644953900 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_003111524 |
|---|
| Protein GI | 256389960 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.595849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG ACACCATCGC GCCCGGCCCC GAGGCACCCG CCCCGCTGAG CCCGGCGCGC
GCACAGATCG AACAGAAGAC GCTGCGCACA GACAGGTGGT GGCTCAGTCC GCTCCTGACG
ATGCTCGTGC TAGTCGCCTT CATCTTCTAC GCGACGTTCC GCGCGTTCCA GAACGCCGAC
TACTACACCG GCAACCTGAT CTCACCGTTC TACAGCCCGT GCATCGCCAC GAAGTGTGTG
CCGGGCTCGT CCCTGGGCGG CTTCCAGCCG TTCGGCGACT GGTGGGCGAT CTCGCCGGCC
CTGCTCATCC TGATCTTCCC GCTCGGGTTC CGGATGACGT GCTACTACTA CCGCAAGGCC
TACTACCGGG CCTTCTGGCA GTCGCCGCCG GCCTGCGCGG TCGCCGAGCC GCACGGCAAG
TACACCGGCG AGCGCCGCTT CCCGCTGATC CTGAACAACT CGCACCGCTA CTTCTTCTAC
GCGGGCCTGG TCTTCAACGT CATCCTGAGC TGGGACGCGG TGCTGGCCTT CCGCAACCCC
GCGGGCGAGT GGGGCCACAT GAGCGTGGGC ACGCTGGTGC TGATCGCGAA CGCCGTGCTG
CTGTGGGTCT ACTCCCTGTC GTGCCACTCC TGCCGGCACA TCATGGGCGG CAAGCTCAAG
CACTTCAGCA AGCACCCCCT GCGCTACAAG GGGTGGACGC TGGTGTCGAA GCTGAACCAC
CGCCACATGC TCTTCGCGTG GGTCTCGCTG TTCGGCGTGG CGCTGACGGA CGCTTATGTC
GCCCTGGTGG CCAACGGCAC GTTCAGCAAC CCGACGTTCT TCTAA
|
|---|
| Protein sequence | MATDTIAPGP EAPAPLSPAR AQIEQKTLRT DRWWLSPLLT MLVLVAFIFY ATFRAFQNAD
YYTGNLISPF YSPCIATKCV PGSSLGGFQP FGDWWAISPA LLILIFPLGF RMTCYYYRKA
YYRAFWQSPP ACAVAEPHGK YTGERRFPLI LNNSHRYFFY AGLVFNVILS WDAVLAFRNP
AGEWGHMSVG TLVLIANAVL LWVYSLSCHS CRHIMGGKLK HFSKHPLRYK GWTLVSKLNH
RHMLFAWVSL FGVALTDAYV ALVANGTFSN PTFF
|
|---|
| |