| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0747 |
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| Symbol | sdhA |
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| ID | 8332077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 869166 |
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| End bp | 871211 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953899 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003111523 |
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| Protein GI | 256389959 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.533277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA ACACCGAGAG CACCGAGAAC GCGGAGAGCA TCGAGCGCCA CTCCTACGAC
GTGGTGGTGA TCGGGGCCGG CGGCGCGGGA CTGCGTGCCG CGATCGAGGC CCGGCACTCC
GGCAAGCGCG TCGCCATCAT CAGCAAGTCC CTGTTCGGCA AGGCGCACAC CGTCATGGCC
GAGGGCGGCG CGGCAGCCGC CATGGGCAAC GTGAACTCCA AGGACAACTG GCAGGTCCAC
TTCCGCGACA CGATGCGCGG CGGCAAGTTC CTGAACCACT TCCGGATGGC CGAGCTGCAC
GCCAAGGAGG CTCCCGACCG CATCTGGGAG CTGGAGGCCT GGGGCGCGCT GTTCGACCGC
ACCAAAGAGG GCAAGATCAG CCAGCGCAAC TTCGGCGGGC ACGAGTACCC GCGGCTGGCG
CACGTCGGCG ACCGGACCGG CCTGGAGCTG ATCCGCACCC TGCAGCAGCG CGTGGTCGCG
CTCCAGCAGG AGGACCAGGC CGCGAGCGGG GAGTACGACG GCAGCCTGCG CGTCTTCGCC
GAGACCACGA TCGTCCGGCT GCTCAAGGAC GAGCAGGGCC GCATCGCCGG CGCGGTCGGC
TATTACCGCG AGACCGGGCA GTTCGTGCTC TTCGAAGCGC CCGCGGTGAT CATGGCCACC
GGCGGCATCG GCCGCAGCTA CACCGTCACC AGCAACAGCT GGGAGTACAC CGGCGACGGC
CACGCGCTGG CCCTGCTCGC CGGCGCCGCG CTGGTGAACA TGGAGTTCAT CCAGTTCCAC
CCGACCGGCA TGGTCTGGCC GCCCTCGGTG AAGGGCATCC TGGTCACCGA GTCGGTGCGC
GGCGACGGCG GCGTGCTCCG CAACAGCGAG GGCAAGCGGT TCATGTTCGA CTACGTGCCG
GACGTCTTCC GCAAGCAGTA CGCGGAGACC GAGGACGAGG CCGACCGCTG GTACGACGAC
CAGGAGAACA ACCGGCGCCC CCCCGAGCTG CTGCCCCGCG ACGAGGTCGC GCGCTCGATC
AACTCCGAGG TGAAGGCCGG CCGCGGGACC CCGAACGGCG GCGTGTACCT GGACGTCTCC
ACGCGTCTGC CGGCCGAGGA GATCCGCCGC CGGCTGCCCT CGATGTACCA CCAGTTCAAG
GAGCTGGCGG ACGTCGACAT CACGGCGCAG CCGATGGAGG TCGGCCCGAC GTGCCACTAC
GTCATGGGCG GCATCGAGGT CGACCCGGAC ACCCAGGGCA CGAAGGTTCC CGGCCTGTAC
GCGGCCGGCG AGTGCTCCGG CGGTATGCAC GGCTCCAACC GGCTCGGCGG CAACTCGCTG
TCCGACCTGC TGGTGTTCGG GCGCCGCGCG GGCCTGCACG CCGCGGAGTA CGTCGACGGG
CTCGGCGCGT CCGGCGCGCC GGCGGTCGCC CAGGCCGACG TGGACGCCGC CGTCGAGGAG
GCGCTGGCGC CGCTGGCGAA CCCGGACGGC GAGAACCCCT ACACCCTGCA CCACGACCTG
CAGGTCGCGA TGAACACGCT GGTCGGCATC ATCCGCAAGC CGGAGGAGGT CAGCGAGGCG
CTGACCAAGC TGGAGGACTT CAAGCCCCGG CACAAGAAGG TCGGCTCGGT CGGCGGTCGC
CGCTTCAACC CCGGCTGGCA CGTCGCGCTG GACCTGCGCA ACATGCTGAT CGTCAGCGAG
TGCGTGGCCA AGGCGGCGCT GGAGCGCGAG GAGTCCCGCG GCGGCCACAC CCGCGACGAC
TTCCCGGCGA TGTCCTCGAA GTGGCGGCAG GTCAACCTGA TCTGCTCGCT CAGCGAGGAC
GGCGCCGGCA TCGACCTGTT GCACCAGCCG ATCCCGACGA TCCGTCCGGA CCTGCTCGGG
CTGTTCGAGA TGTCCGAGCT GAAGAAGTAC TTCACGGACG AGGAGCTGGC GGTGCTCGGC
GCCGACTCCG CCTCGATCCC CGGCCAGAAG GACACCGAGG CCCAGGCCGC CGAGCAGACC
GCGCAGGCCG AGGCCGGCGC CCAGGCCGAG AGCGCCACGT CCGACACCGC CGCCGAGGAG
AAGTGA
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| Protein sequence | MTDNTESTEN AESIERHSYD VVVIGAGGAG LRAAIEARHS GKRVAIISKS LFGKAHTVMA
EGGAAAAMGN VNSKDNWQVH FRDTMRGGKF LNHFRMAELH AKEAPDRIWE LEAWGALFDR
TKEGKISQRN FGGHEYPRLA HVGDRTGLEL IRTLQQRVVA LQQEDQAASG EYDGSLRVFA
ETTIVRLLKD EQGRIAGAVG YYRETGQFVL FEAPAVIMAT GGIGRSYTVT SNSWEYTGDG
HALALLAGAA LVNMEFIQFH PTGMVWPPSV KGILVTESVR GDGGVLRNSE GKRFMFDYVP
DVFRKQYAET EDEADRWYDD QENNRRPPEL LPRDEVARSI NSEVKAGRGT PNGGVYLDVS
TRLPAEEIRR RLPSMYHQFK ELADVDITAQ PMEVGPTCHY VMGGIEVDPD TQGTKVPGLY
AAGECSGGMH GSNRLGGNSL SDLLVFGRRA GLHAAEYVDG LGASGAPAVA QADVDAAVEE
ALAPLANPDG ENPYTLHHDL QVAMNTLVGI IRKPEEVSEA LTKLEDFKPR HKKVGSVGGR
RFNPGWHVAL DLRNMLIVSE CVAKAALERE ESRGGHTRDD FPAMSSKWRQ VNLICSLSED
GAGIDLLHQP IPTIRPDLLG LFEMSELKKY FTDEELAVLG ADSASIPGQK DTEAQAAEQT
AQAEAGAQAE SATSDTAAEE K
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