Gene Caci_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0746 
Symbol 
ID8332076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp868399 
End bp869163 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID644953898 
Productfumarate reductase iron-sulfur subunit 
Protein accessionYP_003111522 
Protein GI256389958 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.224989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.659261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATACA AGGGCAAGTT CAAGGTCTGG CGCGGCGACG CCTCCGGCGG CGACCTGAAG 
GACTTCGAAG TCGAGATCAA CGAGGGCGAG GTCGTCCTCG ACATCATCCA CCGGCTCCAG
GCCACGCAGG CGCCGGACAT GGCCTGCCGC TGGAACTGCA AGGCCGGCAA GTGCGGCTCG
TGTTCGGCGG AGATCAACGG CAAGCCGCGC CTGATGTGCA TGACCCGCAT GTCGACCTTC
GAGCAGGACG AGACGATCAC CGTCACCCCC CTGCGCACCT TCCCGGTGAT CAAGGACCTG
GTGACGGACG TCGGCTTCAA CTACACCAAG GCCCGCGAGG TGAAGTCCTT CACCCCGCCC
GCGGACCTGA AGCCCGGCGA GTACCGCATG CAGCAGATCG ACGTGGAGCG CTCGCAGGAG
TTCCGCAAGT GCATCGAGTG CTTCCTGTGC CAGAACACCT GCCACGCGGT GCGCGACCAC
GAGGAGAACA AGGAGAGCTT CAGCGGCCCG CGCTACCTGA TGCGCGTCGC GGAGCTCGAC
ATGCACCCCC TGGACACCGC CGCCGACCGC AAGAAGTCGG CGCAGGAGGA GCACGGCCTC
GGCTTCTGCA ACATCACCAA GTGCTGCACC GAGGTCTGCC CCGAGCACAT CCACATCACC
GACAACGCGC TGATCCCGCT CAAGGAGCGC GTCGTCGACA AGAAGTACGA CCCGCTGGTG
TGGCTGGGCA ACAAGATCCG GCGCCGGACG TCCTCGGACG CCTGA
 
Protein sequence
MGYKGKFKVW RGDASGGDLK DFEVEINEGE VVLDIIHRLQ ATQAPDMACR WNCKAGKCGS 
CSAEINGKPR LMCMTRMSTF EQDETITVTP LRTFPVIKDL VTDVGFNYTK AREVKSFTPP
ADLKPGEYRM QQIDVERSQE FRKCIECFLC QNTCHAVRDH EENKESFSGP RYLMRVAELD
MHPLDTAADR KKSAQEEHGL GFCNITKCCT EVCPEHIHIT DNALIPLKER VVDKKYDPLV
WLGNKIRRRT SSDA