Gene Caci_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0722 
Symbol 
ID8332052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp841179 
End bp842270 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content73% 
IMG OID644953874 
ProductPfkB domain protein 
Protein accessionYP_003111498 
Protein GI256389934 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.140829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGC CGTGGGCGGT GTGCGTCGGC GAGTCGATGG CGGCGCTGTT GCCGGACGTG 
CCGGGACCGT TGGACGGCGT CGAATCGTTC GCGGTCTCGG CGGGCGGCGC GGAGTCGAAC
GTGGCGTGCG CGCTGCGTGC GCTGGGCGTG CCGAGCGCGT GGATCAGCCG GGTCGGCGAC
GACGGCTTCG GACGTCGGCT GGTCGGCGAG GTGACGGCGC GCGGCGTGGA CACCTCGGGC
GTCGCGGTCG ATCCCCTGCG CCCGACCGGG CTGTACCTGA AGGAGACCGG CGGATCGACG
CGCGACGGGG ACCTCGGCAC GGGTCGCAGC AAGCTGCATT ACTACCGCGC GGGCTCGGCG
GCGTCAGCGA TGTCGGCCGC GACGCTGCGC GATCCCGCGG TCGAGCGGCT GGTGGACGGC
GCGCGGCTGG TGCACCTGAC GGGCATCACG CCGGCGCTGT CGGAGACGTG CCTGGACATG
GTGCGTGCGC TGCTCGACGC ACCGCGCGGC CAGCGGCTGG TCAGCTTCGA CCTGAACTTG
CGCCCGGTAC TGTGGCGCGA CCGCGACGCG GGAGTGCTGC GGGAGTTCGT GAACGCGGCC
GACGTCGCGC TGCTGGGTGC GGACGAGGCG GAAATCGCTT TCGGCACAGG CGATCCGGCG
AAACTCAGGG CACTGTTTCC CGGTCCGACG ACGATCGTGG TGAAGGACGC CGAGCGGGTG
GTCACCGCGC TCACAGCGAA GGGCGCCGTG TCCGAGCCCG CGCTGACGGT CGACGTGGTC
GAGCCGACCG GCGCAGGCGA CGCCTTCGCG GCCGGCTACC TGGCCGGCAC CCTGCACGGC
TTCGACGAGC GCCGACGCCT GCGACTCGGC CACCTGGCTG CCGCCTCGGC GCTGGTGGCG
CAGGGCGATG TGGGGGAGTT GGGGGATCTG AGTCGGCTTG CTGATGCGGA TGCCGGTGGT
TCTGCTGGCG CGGCCGAGGA CGACGGTCAA TGGTCGGCGG CGACGGTCGC GGCACTGCTG
GACGCCCCGG AGGAGCAGTG GCGCGCGACG CGGATTTCGG CCGATGGCAT CGCGTTCGGC
GGGCTGAGGT GA
 
Protein sequence
MVTPWAVCVG ESMAALLPDV PGPLDGVESF AVSAGGAESN VACALRALGV PSAWISRVGD 
DGFGRRLVGE VTARGVDTSG VAVDPLRPTG LYLKETGGST RDGDLGTGRS KLHYYRAGSA
ASAMSAATLR DPAVERLVDG ARLVHLTGIT PALSETCLDM VRALLDAPRG QRLVSFDLNL
RPVLWRDRDA GVLREFVNAA DVALLGADEA EIAFGTGDPA KLRALFPGPT TIVVKDAERV
VTALTAKGAV SEPALTVDVV EPTGAGDAFA AGYLAGTLHG FDERRRLRLG HLAAASALVA
QGDVGELGDL SRLADADAGG SAGAAEDDGQ WSAATVAALL DAPEEQWRAT RISADGIAFG
GLR