Gene Caci_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0721 
Symbol 
ID8332051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp839692 
End bp841026 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content71% 
IMG OID644953873 
Productalanine racemase domain protein 
Protein accessionYP_003111497 
Protein GI256389933 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.06158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCACC AGACGTTCGG CAGCCGCACC GCGAGCGCCG GCATCGACCG GACCGCCGTC 
GCCGCTCTCG CCGACGAGCA CCTCGACTGG CGCTTCAAAG CCCTGCCGCC GCAAGCCTGG
GACCGCACCG CGCACGCCTA CGTAGCCTCG GGCCCGCGCC TGTCCGACCT GGGCACGCCG
CTCCTGACCC TCGACGCCGG CGCCCTGGAC CACAACCTGC GCACCATGGC CGCCTGGTGC
CACGAAGCCG GCGTCGCCCT CGCCCCGCAC GGCAAGACGA CGATGGCGCC CTCGCTCTGG
CAGGCGCAGC TCGACGCCGG CGCGATCGGC ATCACGCTCG CCAACCTCCC GCAGCTCCGC
GTCGCCCGCG CCTTCGGCGT CCAGCGCCTC ATGCTCGCCA ACGCCCTCCT CGACCCGGCG
GGTCTGGCAT GGATCGCCGC CGAGTTGAAC GCCGATCCCG ACTTCGCCTT CGTCTCGTGG
GCGGACTCGG TCGAGACCGT CACCCGTATG GACGCCGCCT TGCGCGCCGC AGGTGTCGGC
AGCGGTCCCG ATCCCGAGAC CGACCGCCCG ATCGAGGTCC TCGTCGAACT CGGCGGCGCC
GGCGGACGCA CCGGAGCGCG CAGCATCACA GAGGCCGAAG ACGTCGCGCG CGCCATCCAA
GCCGCACCCA CGCTGAAGCT CGCCGGTATC GCAGGATACG AAGGCGCCCT CGCCCACGAC
GCTTCCGCCG AAAGCCTCGA GACCGTTCGC CACTACCTCC GCGACCTCGC CGAACTGCAC
CGCCGACTCG CGGCGGGCTA CGAGACCGAC CACGCCGTCG TCACCGCGGG CGGCAGCGCC
TACTTCGACA CCGTCGCCGA GATCCTGCAA CCGGCGGCCA CCGAATCAGG AGCCGAAGTC
GTCCTGCGCT CCGGCGCCTA CGTCATCCAC GACGACGGCC ACTACCGCAA GATCTCGCCG
CTCTCTCGCG ACACCACGAC CGCCAAAACC CCTTTCCGAG CAGCGATGCA CGGCTGGGCC
CGCGTCGTGT CCCACCCCGA ACCACAGCTC TCGCTCCTCG ACGCTGGCAA GCGCGACTTC
CCCTTCGACG AAGGCCTGCC GACGCCGCAG ATCGTCCAAG GCGGCGCCGG GGCAGCCGCC
GGCGTCGTCA CCGCGCTGAA CGACCAACAC ACGTTCCTGC GCGACGCCGG CGAGACCGCT
CCCATCGGCG CCGTCGTCCG CTTCGGTCTC TCGCATCCGT GCACCGCGCT CGACAAATGG
ACCCTGATCC CCGTCCTCGA CGACGCCGAC AGCGCCGACC CGCAGATCGT CGATCTGGTG
AGGACGTTCT TCTGA
 
Protein sequence
MVHQTFGSRT ASAGIDRTAV AALADEHLDW RFKALPPQAW DRTAHAYVAS GPRLSDLGTP 
LLTLDAGALD HNLRTMAAWC HEAGVALAPH GKTTMAPSLW QAQLDAGAIG ITLANLPQLR
VARAFGVQRL MLANALLDPA GLAWIAAELN ADPDFAFVSW ADSVETVTRM DAALRAAGVG
SGPDPETDRP IEVLVELGGA GGRTGARSIT EAEDVARAIQ AAPTLKLAGI AGYEGALAHD
ASAESLETVR HYLRDLAELH RRLAAGYETD HAVVTAGGSA YFDTVAEILQ PAATESGAEV
VLRSGAYVIH DDGHYRKISP LSRDTTTAKT PFRAAMHGWA RVVSHPEPQL SLLDAGKRDF
PFDEGLPTPQ IVQGGAGAAA GVVTALNDQH TFLRDAGETA PIGAVVRFGL SHPCTALDKW
TLIPVLDDAD SADPQIVDLV RTFF