Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0721 |
Symbol | |
ID | 8332051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 839692 |
End bp | 841026 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953873 |
Product | alanine racemase domain protein |
Protein accession | YP_003111497 |
Protein GI | 256389933 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.06158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCACC AGACGTTCGG CAGCCGCACC GCGAGCGCCG GCATCGACCG GACCGCCGTC GCCGCTCTCG CCGACGAGCA CCTCGACTGG CGCTTCAAAG CCCTGCCGCC GCAAGCCTGG GACCGCACCG CGCACGCCTA CGTAGCCTCG GGCCCGCGCC TGTCCGACCT GGGCACGCCG CTCCTGACCC TCGACGCCGG CGCCCTGGAC CACAACCTGC GCACCATGGC CGCCTGGTGC CACGAAGCCG GCGTCGCCCT CGCCCCGCAC GGCAAGACGA CGATGGCGCC CTCGCTCTGG CAGGCGCAGC TCGACGCCGG CGCGATCGGC ATCACGCTCG CCAACCTCCC GCAGCTCCGC GTCGCCCGCG CCTTCGGCGT CCAGCGCCTC ATGCTCGCCA ACGCCCTCCT CGACCCGGCG GGTCTGGCAT GGATCGCCGC CGAGTTGAAC GCCGATCCCG ACTTCGCCTT CGTCTCGTGG GCGGACTCGG TCGAGACCGT CACCCGTATG GACGCCGCCT TGCGCGCCGC AGGTGTCGGC AGCGGTCCCG ATCCCGAGAC CGACCGCCCG ATCGAGGTCC TCGTCGAACT CGGCGGCGCC GGCGGACGCA CCGGAGCGCG CAGCATCACA GAGGCCGAAG ACGTCGCGCG CGCCATCCAA GCCGCACCCA CGCTGAAGCT CGCCGGTATC GCAGGATACG AAGGCGCCCT CGCCCACGAC GCTTCCGCCG AAAGCCTCGA GACCGTTCGC CACTACCTCC GCGACCTCGC CGAACTGCAC CGCCGACTCG CGGCGGGCTA CGAGACCGAC CACGCCGTCG TCACCGCGGG CGGCAGCGCC TACTTCGACA CCGTCGCCGA GATCCTGCAA CCGGCGGCCA CCGAATCAGG AGCCGAAGTC GTCCTGCGCT CCGGCGCCTA CGTCATCCAC GACGACGGCC ACTACCGCAA GATCTCGCCG CTCTCTCGCG ACACCACGAC CGCCAAAACC CCTTTCCGAG CAGCGATGCA CGGCTGGGCC CGCGTCGTGT CCCACCCCGA ACCACAGCTC TCGCTCCTCG ACGCTGGCAA GCGCGACTTC CCCTTCGACG AAGGCCTGCC GACGCCGCAG ATCGTCCAAG GCGGCGCCGG GGCAGCCGCC GGCGTCGTCA CCGCGCTGAA CGACCAACAC ACGTTCCTGC GCGACGCCGG CGAGACCGCT CCCATCGGCG CCGTCGTCCG CTTCGGTCTC TCGCATCCGT GCACCGCGCT CGACAAATGG ACCCTGATCC CCGTCCTCGA CGACGCCGAC AGCGCCGACC CGCAGATCGT CGATCTGGTG AGGACGTTCT TCTGA
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Protein sequence | MVHQTFGSRT ASAGIDRTAV AALADEHLDW RFKALPPQAW DRTAHAYVAS GPRLSDLGTP LLTLDAGALD HNLRTMAAWC HEAGVALAPH GKTTMAPSLW QAQLDAGAIG ITLANLPQLR VARAFGVQRL MLANALLDPA GLAWIAAELN ADPDFAFVSW ADSVETVTRM DAALRAAGVG SGPDPETDRP IEVLVELGGA GGRTGARSIT EAEDVARAIQ AAPTLKLAGI AGYEGALAHD ASAESLETVR HYLRDLAELH RRLAAGYETD HAVVTAGGSA YFDTVAEILQ PAATESGAEV VLRSGAYVIH DDGHYRKISP LSRDTTTAKT PFRAAMHGWA RVVSHPEPQL SLLDAGKRDF PFDEGLPTPQ IVQGGAGAAA GVVTALNDQH TFLRDAGETA PIGAVVRFGL SHPCTALDKW TLIPVLDDAD SADPQIVDLV RTFF
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