Gene Caci_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0711 
Symbol 
ID8332041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp829493 
End bp830197 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID644953863 
ProductGntR domain protein 
Protein accessionYP_003111487 
Protein GI256389923 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.103859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.118228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAACG GACTCACAGG CATCCAGCGC GGCTCTCTGG TCGACGAAGT CATCGACAAG 
CTCCGCGAAC AGATCGGCAG CGGCGCCTGG CCGGTCGACG CCCGCATCCC CACCGAGCCG
GAGTTGGTCG AGGCCCTGAA CGTGGGCCGC GGCACGGTCC GCGAGGCGGT GCGGGCGCTG
GCGCACGCCG GCCTGCTGGA GGTGCGCCGC GGCGACGGCA CGTACGTCCG CGCCCGGAGC
GAGCTGTCCG GCGCGCTGCG GCGCGAGATC CAGGCGACCA CGCACGACCA CGTCCAGGAA
GTCCGCCGCG CCATCGAGGT CGAGGCGGCC CGTCTGGCCG CACGCCGCGC GAACCCCGCC
GACCTCGCAG CGTGCGCCGA CGCCCTGGCG GCCCGCGACC TCGCGGCGCG CAAGGTCGAG
AAGGCCGACC CGGGCGACAC CTCATGGGTC GACGAGTGGG TCGAGGCCGA CGCGCACTTC
CACACCGCGA TGGTCGCCGC CGCCGGCAAC CCGCTTCTGC TCGACCTCTA TCTGGAGATC
GGCAGCGCGC TGCGCACGGT GCTGACCGAA CGCGCGCTGC GCACCGACTT CGACCGCTTC
CTGGTCGCCG GTCACAGCAC CCTGCTGGAC GCGGTGCGCG CCGGGGATCC CGAGGCCGCG
GTACGCGAGG CTTCGCTGAA CGTGGAGACC AGCGCCGAAG AGTAA
 
Protein sequence
MANGLTGIQR GSLVDEVIDK LREQIGSGAW PVDARIPTEP ELVEALNVGR GTVREAVRAL 
AHAGLLEVRR GDGTYVRARS ELSGALRREI QATTHDHVQE VRRAIEVEAA RLAARRANPA
DLAACADALA ARDLAARKVE KADPGDTSWV DEWVEADAHF HTAMVAAAGN PLLLDLYLEI
GSALRTVLTE RALRTDFDRF LVAGHSTLLD AVRAGDPEAA VREASLNVET SAEE