| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0704 |
|---|
| Symbol | |
|---|
| ID | 8332034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 822147 |
|---|
| End bp | 824279 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644953856 |
|---|
| Product | protein of unknown function DUF255 |
|---|
| Protein accession | YP_003111480 |
|---|
| Protein GI | 256389916 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.108569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGAT TGGCTAGCGC GACCTCGCCT TACCTGCTGC AGCACGCCGA CAACCCCGTC
GATTGGTGGC CCTGGGGAGA AGAAGCGTTC GCGGAAGCAC GTCGTCGAGA TGTACCTGTT
CTGCTGTCAA TCGGGTACGC CGCGTGCCAC TGGTGTCATG TGATGGCGCA CGAGAGCTTC
GAGGATGAGG CGACTGCTGC GCTCATGAAT GAGAAGTACG TGTGCGTGAA GGTGGATCGG
GAGGAGCGGC CTGATGTGGA TGCCGTCTAT ATGGCGGCTA CGCAGGCTAT GACGGGGGGT
GGCGGGTGGC CTATGACGGT GTTCGCCACG CCTGAGGGGA AGCCTTTTCA GGCTGGGACT
TACTACCCGC CGGTGGCGCG GCATGGGTTG CCTTCTTTTC GGCAGTTGCT GGTGGCTGTT
GATCGGGCTT GGGGGGATAT TCGGGAGGAT GTGCTGCGGG CTGGGGATGG GCTCGTTGCG
GAGTTGGCGC ATCATGCTCG GGTTGTCGCC GGTGCTGAGG GGGTGCCGGA TGCGGGTGCT
TTGGCGACTG CCGTCGGGGT GCTGCGGCGT GAGTTCGATG GGGTGCGGGG CGGGTTCGGG
GGTGCGCCGA AGTTTCCGCC GTCCATGACG TTGGAGCAGT TGCTGCGGCA TCATGCGCGG
ACCGGGGACG CCGATGCTCT GGCGATGGTG CGGCAGACGT GTGAGGCGAT GGCGCGCGGG
GGCATGTACG ACCAGCTGGG TGGCGGGTTC GCGCGGTACG CCGTGGACGA TGCGTGGGTC
GTGCCGCACT TCGAGAAGAT GTTGTATGAC AACGCTTTGC TGCTTCGTGC CTACCTCCAC
CTGTGGCGCG CCACCGGTGA CGCCCTCGCG CTGCGCGTCG TCAATGAGAC CGCCGACTGG
ATGCTGCGCG AGCTGTGGCT GGACGGCGCC GGCGGATTCG CCTCCTCGCT GGACGCCGAC
ACCGACGGGG TCGAGGGCAA GTTCTATGCC TGGGACGCTG AACAGATCGC AGACGCCGTA
GGTGAGAAGG AAGCGGGGGA CGCGGGGGAT GCTGCTTGGG CGGCAGCCGT CTTCAATGTG
ACAGCCCAAG GCACCTTCGA ACACGGGCTC TCCGTCCTCC AGCTCCTGCA GGACCCTGAT
GATCTCGATC GCTTCCAGCG CATCCGCGAC AGCCTGTTCG AAGCCCGCCG GGACCAGCGC
ACCGCACCGG GACGCGACGA CAAGGCCGTG GCGGCGTGGA ACGGTCTGGC GGTGGCGGCG
CTGGCCGAAG CCGGTGCGCT GACCGGACGC CAGGAGCTGG TGTCGGCGGC GCGTCAGACC
GCTGAGATGC TCGAGCGCAT CCACTGGGAC GGCAAGACGA TGCGCCTGAC GCGTACCTCG
CGGGACGGCG TCGCCGGGGC GCAGAATCCG GGCGTCCTGG AGGACTACGC GGACGTCGCC
GAGGGCCTGC TGGCGTTGTA CGCGGTCACC GGCGAGACGC GCTGGTTCGC CTTCGCGGGC
CGGCTGCTGG ACGTCGTCCT CGACAACTTC CGCGACGACT CAGGCCTCTT CTACGACACC
GCCGACGACG CCGAGGCCCT GATCTTCCGC CCGGCGGATC CGACCGACAA CGCCACGCCC
GGCGGGACGT CCGCGGCGGC TGGTGCCCTG CTCACGTACG CCGCGCTCAC CGGGTCGGGG
CGTCATCGCG AGGCTGCCGA GCAGGCGTTG CACTTCACCG GCGCGCTGGC GGAGAAGGCG
CCGAGGTTCG CGGGGTGGGG ACTGGCGGTC GCCGAGGCGC TGGCGGACGG GCCGCGCGAG
GTGGCGATCA TCGGTGAGTG GAATGGTGAG TGGAATGGAG AGTGGGGTGG CGATGCGGCG
AGTGCCGAGG AGGGCGCTGA AACCGCGACC AGCCAAGCCT TCCAGGCGCT CCACCTCGCT
GCCCTCCGCA GCGCCGCGCC CGGCCTCGTC GTCGCCGTGA CGCCGCCGAC CGGAGCGGCG
CAGCCGGCGC ACGGGTCCGG CACCGAGAAC CTCCCCGAAC TGCTCAGCGA CCGGTCCACC
ATCAACGGTG AACCGGCCGC GTACGTCTGC CGGGGCTTCG TGTGTCAGAC CCCGACGACG
GATGTCACCG AGATGACGGC GCAGTTGGCG TAG
|
|---|
| Protein sequence | MNRLASATSP YLLQHADNPV DWWPWGEEAF AEARRRDVPV LLSIGYAACH WCHVMAHESF
EDEATAALMN EKYVCVKVDR EERPDVDAVY MAATQAMTGG GGWPMTVFAT PEGKPFQAGT
YYPPVARHGL PSFRQLLVAV DRAWGDIRED VLRAGDGLVA ELAHHARVVA GAEGVPDAGA
LATAVGVLRR EFDGVRGGFG GAPKFPPSMT LEQLLRHHAR TGDADALAMV RQTCEAMARG
GMYDQLGGGF ARYAVDDAWV VPHFEKMLYD NALLLRAYLH LWRATGDALA LRVVNETADW
MLRELWLDGA GGFASSLDAD TDGVEGKFYA WDAEQIADAV GEKEAGDAGD AAWAAAVFNV
TAQGTFEHGL SVLQLLQDPD DLDRFQRIRD SLFEARRDQR TAPGRDDKAV AAWNGLAVAA
LAEAGALTGR QELVSAARQT AEMLERIHWD GKTMRLTRTS RDGVAGAQNP GVLEDYADVA
EGLLALYAVT GETRWFAFAG RLLDVVLDNF RDDSGLFYDT ADDAEALIFR PADPTDNATP
GGTSAAAGAL LTYAALTGSG RHREAAEQAL HFTGALAEKA PRFAGWGLAV AEALADGPRE
VAIIGEWNGE WNGEWGGDAA SAEEGAETAT SQAFQALHLA ALRSAAPGLV VAVTPPTGAA
QPAHGSGTEN LPELLSDRST INGEPAAYVC RGFVCQTPTT DVTEMTAQLA
|
|---|
| |