Gene Caci_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0703 
Symbol 
ID8332033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp820683 
End bp821993 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content65% 
IMG OID644953855 
Producthypothetical protein 
Protein accessionYP_003111479 
Protein GI256389915 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.232427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.394617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGC AGCGACTGAT CACCCGCCAC CTTCAGCCCG TCCTTGCCGA GTTGCTCGCC 
GACGAACCGG TAGTGGTGCT CACCGGGGCG CGGACCGTCG GCAAGAGCAC GCTCCTGGCG
GCCTGCGCCG AGGTCGAAGG GGTGCCGGTC CTGGATCTCG ACGACCTTCC GACCAGACGC
GCTGTCGCGG CGGACCTCGA ACTGTTCGTG GGAGCCGACC GTCCGACGCC GGTCTGCATC
GACGAGTTCC AGCACGTTCC ACAGCTTCTC GACGCTATCA AGGCCGAGTT GAACAAAGAC
CTGCGTGCCG GGCGGTTCGT ACTGACTGGA TCAACCCGGT ACGGCTCCCT CCCGACTGCC
GGCCAGTCGT TGACCGGTCG AGCCCACGTC GTCACCATGT GGCCGCTGTC CCAAGGTGAG
ATCAACGGGG TCAAGGAAAC CGCCCTCGAC GCCCTGATCA GCGATCCTGC GTCCCTCGTG
GTCAGCGATC CTGCCACGGC CACGCGCGCC GATTACGAGC GTGTCGTTCT CGCCGGCGGA
TTCCCGCTGG CGTTGGCGCG CGACTCCGGA CGCTCTCGCG ACCGCTGGTT CCGCGATTTC
GTGACCCTGG TCGTAGAGCG AGACGTACTG GAGATTCGCA AGGTCCGGCA ACGCCAGGTG
CTTCCCCAAG TGCTACGCCG CCTCGCCGAC CAAACCGGCC AAGTGGTCAA CGTCGCGAAC
ATCGCCGATG CCGTCGGCTT GGATGCCACG ACGGTTAAGG ACTACCTGGG CCTGTTGGAA
GCTGTCTTCC TCATCCATCG AGTCGAACCG TTCACTCGCT CGGCCGCCAA CCGTGCGATC
CGCAGCGCGA AAGCACACGT CGTCGACACC GGACTCGGCG CCCATCTCAT CGGTCTGACC
TCGCAGAAAC TGGCGGGCCG GATGCCCGCC GCCCTGACAC AGTTCGGCCA CCTGGTCGAG
ACATTCGCTG TGAACGAGCT GATGAAACAG GCAGGCTGGG CAAACCAGGA GGTTGAGTTC
TCCCACTTCC GTACACGCGA CCATCAAGAA GTCGACCTCG TCATCGAGAC CGCTGCGGGC
TCCGTCGCCG CGATCGAGGT TAAAGCGTCC GGCACTGTCG CCGACCACGA CTTCGCCGGG
CTCCGGCTAC TACGGGACAA ACTTGGCGAC GCCTTCGTCG GTGGAGCGGT CGTCAACCTC
GGCCAACGGT CGTACACCTA TGAGGAACGC CTCCACGTCC TTCCGCTCGA ACGCCTGTGG
ACACCAGCAT CAAGTGGCAC CAATGACACG CCGCATACCC AACAGAAATG A
 
Protein sequence
MPEQRLITRH LQPVLAELLA DEPVVVLTGA RTVGKSTLLA ACAEVEGVPV LDLDDLPTRR 
AVAADLELFV GADRPTPVCI DEFQHVPQLL DAIKAELNKD LRAGRFVLTG STRYGSLPTA
GQSLTGRAHV VTMWPLSQGE INGVKETALD ALISDPASLV VSDPATATRA DYERVVLAGG
FPLALARDSG RSRDRWFRDF VTLVVERDVL EIRKVRQRQV LPQVLRRLAD QTGQVVNVAN
IADAVGLDAT TVKDYLGLLE AVFLIHRVEP FTRSAANRAI RSAKAHVVDT GLGAHLIGLT
SQKLAGRMPA ALTQFGHLVE TFAVNELMKQ AGWANQEVEF SHFRTRDHQE VDLVIETAAG
SVAAIEVKAS GTVADHDFAG LRLLRDKLGD AFVGGAVVNL GQRSYTYEER LHVLPLERLW
TPASSGTNDT PHTQQK