Gene Caci_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0692 
Symbol 
ID8332022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp804362 
End bp805120 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID644953844 
ProductABC transporter related 
Protein accessionYP_003111468 
Protein GI256389904 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGG CGATCACACG GACGGTCCCG GAGGCGATCA CGCTCCAGGC CGTCAGCAAG 
GTCTACGGCA AGGGACGCGG GGCGGTCGCG GCACTGCGCG AGGTCTCGGT CGGGCTGCCC
AAGGGCGGCT TCACCGCGAT CATGGGCCCG TCCGGATCCG GCAAGAGCAC CTTCCTGCAC
TGTGCCGCCG GGCTGGACCG GCCGAGCGCG GGCACCGTCA AACTCGGCGG GACCGACTTG
TCAGGGCTCA GCGACACCAA GCTGACCGAG CTGCGCCGCG AGCGCGCGGG CTTCGTCTTC
CAGGCGTTCA ATCTGGTGTC CTCGCTGACC GTCAGCCAGA ACATCACGCT GCCGCTGCGC
CTGGCCGGCA AGCGTGCCGA CCGCGCACGG CTGGCGGCGG TGCTCCAGCG CGTCGGTCTC
ACCGATCGCA CCGGCCACCG TCCCGGCCAG CTCTCCGGCG GTCAGCAGCA GCGGGTCGCG
ATCGCCCGGG CGCTGATCGC CGACCCCGAG GTGATCTTCG CTGACGAGCC CACCGGCGCC
CTGGACACCA TGACCGCGCG CGGGGTGCTG GTCTTGCTGC GCGAGACCGT GGACACGATG
GGCCAGACGA TCGTCATGGT CACGCACGAC CCGGTCGCCG CCGCGTACGC CGACACGGTC
CTGTTCCTCG CCGACGGCCG CATCGCCGAC TCGATGCACG CACCGACCGC CGCCGGTGTC
GCCGACCGCA TGATCCGGCT GGGAGCGTGG GCGCGATGA
 
Protein sequence
MNEAITRTVP EAITLQAVSK VYGKGRGAVA ALREVSVGLP KGGFTAIMGP SGSGKSTFLH 
CAAGLDRPSA GTVKLGGTDL SGLSDTKLTE LRRERAGFVF QAFNLVSSLT VSQNITLPLR
LAGKRADRAR LAAVLQRVGL TDRTGHRPGQ LSGGQQQRVA IARALIADPE VIFADEPTGA
LDTMTARGVL VLLRETVDTM GQTIVMVTHD PVAAAYADTV LFLADGRIAD SMHAPTAAGV
ADRMIRLGAW AR