Gene Caci_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0675 
Symbol 
ID8332005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp783812 
End bp784669 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID644953828 
ProductABC transporter related 
Protein accessionYP_003111452 
Protein GI256389888 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TGGTCGTGGA AGACCTGACG ATGCGCTACC GCGGGCACAC CGCCTTGGAC 
GGGGTGGACC TGACGCTGGC GCCGGACACC ATCCACGGGC TGCTGGGCCG CAACGGCGCC
GGCAAGACCA CGCTGATGCG CATCCTCACC GGGCAGGAGT TCGAGACCTC CGGCCGGGTC
GAGGTGTTCG GGCAGCCGCC GCGGGAGAAC CCGGCGGTGC TGAACCGGGT GTGCTTCATC
CGCGAGGCGC AGAAGTACCC GCAGAACTTC AAGGTGCGCG AGGCCTTCGC CGCCGCCGCG
ATCGCCTGCC CCGGCTGGGA CCAGGCGTAC GCCGACCGGC TGGTGCAGGA CTTCGACCTG
CCGCTCAAGC GCCAGATCAA GAAGCTCTCG CGCGGGCAGC TCTCGGCGGT CGGCATCATC
ATCGGCCTGG CCGCGCGCGC CCCGCTGACC TTGTTCGACG AGCCGTACCT GGGCCTGGAC
GCGGTCGCGC GGCACGTCTT CTACGACCGG CTGCTGGAGG ACTTCTCCGA GAACCCGCGC
ACCGTCATCT TGTCCACCCA CCTCATCGAC GAGGTCGCCG ACCTGGTCGA GCATGTGGTC
CTGATCGACC ACGGCACGGT GCTGATGGAC GCCGACGCCG ACGGGCTGCG CGGCCGCGCG
GTGTCGGTGA GCGGGCCCGC CGAGGCCGTG GCCGCCTACG TCGAGGACGC ACCGGTGCTG
CACCGCTCGG GACTCGGCGG GCAGCTGCGG GTGGCGCTCG CCGAACGGCC GGAGCGGCCC
GCCGAGGGCG TCAGCGTGGA CTCGCTGTCG CTGCAGGAAC TGATCGTGCT GACCACGAAC
CAGGGGGACG GGAAATGA
 
Protein sequence
MNAVVVEDLT MRYRGHTALD GVDLTLAPDT IHGLLGRNGA GKTTLMRILT GQEFETSGRV 
EVFGQPPREN PAVLNRVCFI REAQKYPQNF KVREAFAAAA IACPGWDQAY ADRLVQDFDL
PLKRQIKKLS RGQLSAVGII IGLAARAPLT LFDEPYLGLD AVARHVFYDR LLEDFSENPR
TVILSTHLID EVADLVEHVV LIDHGTVLMD ADADGLRGRA VSVSGPAEAV AAYVEDAPVL
HRSGLGGQLR VALAERPERP AEGVSVDSLS LQELIVLTTN QGDGK