Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0664 |
Symbol | |
ID | 8331994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 772285 |
End bp | 773526 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953817 |
Product | threonine dehydratase |
Protein accession | YP_003111441 |
Protein GI | 256389877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTGCC AAACTGGGAT CATGTCAATT GCGACTGTGA CCTTGGAAGA CGTCGAGCGG GCTCGTGACC TGCTGGAAGG CGTCGCGCGG CGCACCCCGC TGGAGGGCTC GCGGAGCATC TCGGAGCGGG TCGGGGGACA CGTCCACCTC AAGTGCGAGA ACCTCCAGCG GACCGGGTCG TTCAAGATCC GCGGGGCGTA TGTGCGGATC TCGAACCTGA CGGCGGCCGA GCGGGCCAAC GGTGTGGTCG CGGCCAGCGC CGGCAACCAC GCGCAGGGCG TGGCGCTGGC GGCGTCGCTG CTGGACAGCA AGTCGACCGT GTTCATGCCC GAGCGCGCGC CGCTGCCGAA GGTGGCCGCG ACCGAGGCCT ACGGCGCGCA CGTGCGTTTC GCCGGGCACA CCGTGGACGA GGCGCTGATC GCCGCTCGGG CCTTCGCCGC CGAGACCGGC GCCACCTTCA TCCACCCCTT CGACCACCCC GACGTGATCG CCGGGCAGGG CACGGTCGGG CTGGAGATCC TGGAGCAGTG CCCCGAGGTG CGGACCATCG TGGTCTCGGT CGGCGGCGGC GGGCTGCTGG CCGGGGTCGC CGCGGCGGTG AAGGCGGTCC GGCCGGACGT GCGGGTGGTC GGCGTACAGG CGGCCGGCGC CGCGGCGTAT CCGCCCTCGA TAGCCGCCGG CAAGCCGGTG CAGCTGGCCG GGATGGCGAC GATGGCGGAC GGGATCGCCG TCGGGCGTCC CGGCGACCTG CCGTTCGATC TCATCACCCG GCACGTCGAC GAGATCCGCG TGGTCTCCGA GGAGTCGCTG TCCAAGGCCA TGCTGGCGAT GCTGGAGCGG GCCAAGCTCG TGGTCGAGCC GGCCGGCGCC GCCGCCGTCG CGGCGGTGAT GGACGACGCG CGGTCCTTCG ACGCCCCGGT CGTCGCCGTC CTGTCCGGCG GCAACATCGA CCCGCTGCTG ATGATGCGCA TGATCCGCCA CGGCCTGGTC GCCGCCGGCC GCTTCCTGGC CCTGCGCCTG CGCATCCCGG ACCGCCCCGG CGCGCTGGCG AAGCTCCTGA GCGAACTCGG CGAGGCGGAC GCCAACGTGA TGGACATCGA GCACCTGTGG ACCCGGCCCT CGCTGGCCTT CGGCGAGGTC GAGGTGGCGC TCCAGCTGGA GACGCGCGGC ATCGCGCACG CCGAGACGCT GATCTCGCGG CTGCGGGCGG CGGGGTACCA GCCGGAGCCG ACGTCGTTCT AG
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Protein sequence | MTCQTGIMSI ATVTLEDVER ARDLLEGVAR RTPLEGSRSI SERVGGHVHL KCENLQRTGS FKIRGAYVRI SNLTAAERAN GVVAASAGNH AQGVALAASL LDSKSTVFMP ERAPLPKVAA TEAYGAHVRF AGHTVDEALI AARAFAAETG ATFIHPFDHP DVIAGQGTVG LEILEQCPEV RTIVVSVGGG GLLAGVAAAV KAVRPDVRVV GVQAAGAAAY PPSIAAGKPV QLAGMATMAD GIAVGRPGDL PFDLITRHVD EIRVVSEESL SKAMLAMLER AKLVVEPAGA AAVAAVMDDA RSFDAPVVAV LSGGNIDPLL MMRMIRHGLV AAGRFLALRL RIPDRPGALA KLLSELGEAD ANVMDIEHLW TRPSLAFGEV EVALQLETRG IAHAETLISR LRAAGYQPEP TSF
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