Gene Caci_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0650 
Symbol 
ID8331980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp756225 
End bp756974 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID644953803 
Productprotein of unknown function DUF1503 
Protein accessionYP_003111427 
Protein GI256389863 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.780317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGCA TTGCACACTT CGAGAGGGAA ACAACCGCTT TCCATCGCGC CGCCCTGATG 
GCCGCCGTGC CGGACACCCC GCTACCCGTC CCGTCGTGTC CGGACTGGAC CACCGCGGAC
TTGGTGCGGC ATCTCGGTCG GGTGCAGCGT TTGGTGAACC ACGTGATCGT GGAGCGCCTG
GAGACCATGC CGCCGGACCG GAAGACCATG TTCAGGGCGC CCACCGACGC CACCGCGGAC
GACCTCGCCG ACTGGTTCGC CGAGGGCGCG ACCGCGCTGG CCGAGACGTT CCGCTCCACC
GATCCGAAAA CGGCGGTCTG GACGTGGGGT GACGTGCACG GCGTCAGCTT CTGGCTGCGG
ATGCAGACCA TCGAGGCGGC TGTGCATCGC TGGGATCTGG AGGGCGCGAT CGGTTCTCCC
CAGCCTGTGG ACAAAGAACT CGCGGGCGAT GGCGTGGCCC AGTTCCTCGA CGACGTCATC
CCGTTCCGCC GCCGAACGAA GTCGGTTCCG CCGATGGAGG GGGAGCGTTA CCGCTTCCGC
CAGACGGACG GTTCCGGCGT CTGGTCCGTC GCGCTGGAGC CGGACGGTCT CCGTCCGCTC
GGCGAGGACG AACCCGCCGA CGCCGAACTC GCCGGCACCG CCTCGGATCT CCTGCTCTTC
CTCTGGCACC GCATTCCTGG CGAACCGCTT CTCGTGAGCG GGGATGCGAA AGCGCTTCAG
CGTTTCTTCG TATTGGTGCC GACCGTATAG
 
Protein sequence
MDRIAHFERE TTAFHRAALM AAVPDTPLPV PSCPDWTTAD LVRHLGRVQR LVNHVIVERL 
ETMPPDRKTM FRAPTDATAD DLADWFAEGA TALAETFRST DPKTAVWTWG DVHGVSFWLR
MQTIEAAVHR WDLEGAIGSP QPVDKELAGD GVAQFLDDVI PFRRRTKSVP PMEGERYRFR
QTDGSGVWSV ALEPDGLRPL GEDEPADAEL AGTASDLLLF LWHRIPGEPL LVSGDAKALQ
RFFVLVPTV