Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0647 |
Symbol | |
ID | 8331977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 752952 |
End bp | 754583 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953800 |
Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_003111424 |
Protein GI | 256389860 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.143649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.93944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCA TCACCCACAC CCCCGCCCCG GTCAACGAGC CGGTCCGCGC CTACGCCCCG GGCTCGGCCG AGCGCGACTC GCTCCAGCGC CGGGTCGCCG AGATCGCGGC CGAGCGCCAC GAGCTGCCGA TGACGATCGC CGGGCGGCGC CGGATGGCCT CCGGCGAGCG CGTCGAGGTC GTCCAGCCGC ACAACCACAA GCACGTGCTC GGCGACACCG CCAACGCCTC CGCGGCCGAC GTCGCGGACG CCGTGGCGGC GGCCAAGGCG GCGGCGCCGG CCTGGCGCGC GCTGCCCTTC GACGAGCGCG CGGCGGTCAT CCTGCGCGCC GCGGACCTGC TGTCGGGCCC GTGGCGGGAC ACCGTCAACG CCGCGACCCT GCTCGGCCAG TCGAAGTCGG CGCAGCAGGC GGAGATCGAC GCGGCCTGCG AGCTGATCGA CTTCTGGCGC TTCAACGTGC ACTTCGCGCG GCAGATCCTG GCCGAGCAGC CGCCGGCCAA CTCCGCCGGC GTCTGGAACC GCACCGACTA CCGGCCGCTG GACGGCTTCG TCACCGCGAT CACCCCGTTC AACTTCACCG CCATCGCCGG CAACCTGCCG ACCGCCCCGG CGCTGATGGG CAACACCGTG GTGTGGAAGC CCTCGCCGAC GCAGCAGCTG GCCGCGCAGT ACACGATGGA GCTGCTGGAG GCCGCCGGGC TCCCGGCCGG CGTCATCAAC CTGGTCACCG GCGACGGCCT GGCGGTCAGC GAGGTCGCGC TGAACGACCG CGAGTTCGGC GGTCTGCACT TCACCGGCTC CACCAAGACG TTCAAGGCCC TGTGGCGCCA GACCGCGGAG AACCTGGACG TCTATCGCTC CTACCCGCGC ATCGTGGGCG AGACCGGCGG CAAGGACTTC GTCGTCGCGC ACCCGAGCGC CGACGCGGCC GCTCTGGTCA CCGCGCTGGT CCGGGGAGCG TTCGAGTACC AGGGGCAGAA GTGCTCCGCG GCTTCGCGTG CCTACATCCC GCGCTCCCTG TGGGAGTCCG GCGTGCGGGA GCAGTTGGCC GACGTCACCG GGACCATCAC CTACGGCGAC GTCACCGACT TCTCCTACTT CGGCGGCGCG GTCATCGACC GCCGGGCCTT CACCAAGCAC AGCGACCTGT TCGCGCGGGT CCGTGCCGAG GGCAAGGTGG AGATCCTCGC CGGCGCCACG GCGGACGACT CACAGGGCTT CTTCGTGCAG CCGACGATCC TGGTCGGCGA GGACCCGCAC CACGAGATCT TCACCGACGA GTACTTCGGT CCGATCCTCG CGGTGCACGT CTATGAGGAC GCGCGCTATA GCGAAGTCCT GGAGTTGGTC GACAGCTCCA CGCCCTATGC GTTGACCGGC TCCGTGTTCG CCACGGACCG CGCCGCCGTG GAAGAGGCGC ACCGCAAGCT GCGCTTCGCC GCCGGCAACT TCTACGTCAA CGACAAGCCG ACCGGCGCGG TCGTCGGGCA GCAGCCGTTC GGCGGCGGCC GGGCCTCCGG GACCAACGAC AAGGCCGGCT CCGCGCAGAA CCTGCTGCGC TGGCTGAGCC CGCGCACAGT GAAGGAGACT TTCGTGCCGC CGGTGGACCA CCGGTACCCG CACATGGGCT GA
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Protein sequence | MDAITHTPAP VNEPVRAYAP GSAERDSLQR RVAEIAAERH ELPMTIAGRR RMASGERVEV VQPHNHKHVL GDTANASAAD VADAVAAAKA AAPAWRALPF DERAAVILRA ADLLSGPWRD TVNAATLLGQ SKSAQQAEID AACELIDFWR FNVHFARQIL AEQPPANSAG VWNRTDYRPL DGFVTAITPF NFTAIAGNLP TAPALMGNTV VWKPSPTQQL AAQYTMELLE AAGLPAGVIN LVTGDGLAVS EVALNDREFG GLHFTGSTKT FKALWRQTAE NLDVYRSYPR IVGETGGKDF VVAHPSADAA ALVTALVRGA FEYQGQKCSA ASRAYIPRSL WESGVREQLA DVTGTITYGD VTDFSYFGGA VIDRRAFTKH SDLFARVRAE GKVEILAGAT ADDSQGFFVQ PTILVGEDPH HEIFTDEYFG PILAVHVYED ARYSEVLELV DSSTPYALTG SVFATDRAAV EEAHRKLRFA AGNFYVNDKP TGAVVGQQPF GGGRASGTND KAGSAQNLLR WLSPRTVKET FVPPVDHRYP HMG
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