Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0635 |
Symbol | |
ID | 8331964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 740810 |
End bp | 742102 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953787 |
Product | histidine kinase |
Protein accession | YP_003111412 |
Protein GI | 256389848 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.181904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA CCAACAAGCG ACTGAGCGCC GTCCTGGAGG GCGGGTTCTG GTTCTTCGTG ATGCTGTTCC CGATGCTGCT GGGCACCATC GCCCTGACGC TGGTGGCCGG CATGGCCGGT ATCGGGCTCG GCCTGCTCCT GCTCCCGCCG GCCGCGGTCT ACCTGCGCTG GCTGGCCGAC CTGCGGCGCA CGAAGGTGCG GGCCTGGCGG GGCATCGAGA TCCCGCGGCC CTACCGCGCC GCGCCGGAGT TCGGTCCCGG GTTCGGCGGC TACTTCGAGA GGATCAAGTT CCACGGCACC GACCCGGCGT TCTGGCGGGA CGGCGCGTGG GTGCTCGTCG ACCCGGTCGT CGGCGCGTTC CTGGCGCTCC TCCCCCTCGC CTTGGTGATG GAGGGCCTGT ACGGCTTCGT GATCAGTGCC CTGTGGAGCC TGTTCGTCGA CCACGGCTTC AACGACTGGT TCGGCTTCAT CCACGTCCAC AAGGGCAACG AGGGCATGCG CTGGGCGCCG TCGGCCCTCG GCGTCCTGGA GATCGCCCTG GGCTTCGCCA TCGCGCCGAA GATGCTGGAG TTGCACGCCC GCTGGTCCCG CGTCCTGCTG GCGCCGACGC CGGCCCAGGT CGAGGCCCGG ATGAAGCACC TGACCCAGAC CCGTGCCGAC GCCGTGGACA CCCAGGCCGC CGAGCTGCGC CGGATCGAGC GCGATCTGCA CGACGGCGCG CAGGCGCGGC TGGTCGCCAT GGGCATGCAC CTCAACGCGG CCTCACAATT GATGGAGCGC GACCCCGAGG CGGCGCAGAA GCTCCTGTCG GAAGCCCGCG ATTCCTCGGC CAAGGCGCTG TCCGAGCTGC GTGACCTGGT GCGCGGCATC CACCCGCCGG TGCTGGCCGA CCGCGGTCTG GTCGACGCGG TGCGCGCCAC GGCGCTGGAC TCGCCGCTGG ACGTCGAGGT CCACGCCGAG GTCCCCGGAC GGCTGGACGC GCCGCTGGAG TCGGCGGCGT ACTTCGCGGT CAGCGAGGCC CTGACCAACG TCGCCAAGCA CGCCCACGCC GGGCACGTCT GGATCGACAT GCGGGTCCAC AACGGCTTGC TGAAGATCAC GGTCAGCGAC GACGGAATCG GCGGCGCGGA TCTGGACAAG GGCAGCGGAC TGCGCGGGAT CGAGCGCCGG CTTGCTACCT TCGACGGGAT CCTCGCCCTG AGCAGCCCGC AGGGCGGACC GACTGTCGTG ACCATGGAGC TGCCGTGCGT GTCGTCCTCG CCGAAGACCT CTTCCTCCTC CGGGACGGCA TGA
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Protein sequence | MTNTNKRLSA VLEGGFWFFV MLFPMLLGTI ALTLVAGMAG IGLGLLLLPP AAVYLRWLAD LRRTKVRAWR GIEIPRPYRA APEFGPGFGG YFERIKFHGT DPAFWRDGAW VLVDPVVGAF LALLPLALVM EGLYGFVISA LWSLFVDHGF NDWFGFIHVH KGNEGMRWAP SALGVLEIAL GFAIAPKMLE LHARWSRVLL APTPAQVEAR MKHLTQTRAD AVDTQAAELR RIERDLHDGA QARLVAMGMH LNAASQLMER DPEAAQKLLS EARDSSAKAL SELRDLVRGI HPPVLADRGL VDAVRATALD SPLDVEVHAE VPGRLDAPLE SAAYFAVSEA LTNVAKHAHA GHVWIDMRVH NGLLKITVSD DGIGGADLDK GSGLRGIERR LATFDGILAL SSPQGGPTVV TMELPCVSSS PKTSSSSGTA
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