| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0632 |
|---|
| Symbol | |
|---|
| ID | 8331961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 737127 |
|---|
| End bp | 737744 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953784 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003111409 |
|---|
| Protein GI | 256389845 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.224471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCCAC CTCCGCCGCC CGCACGCGTG ACCGATACCG CGATCCGCGC ATACCTGTCC
CGCTACCTGG CGCGTCATCC GGACCAAACC GAGCGGGTCC GGCCCTTCAG CGAGGCGCTC
GCCGCCGGCA CCGCGCGGAT GACCGACCGC CGCACCCTCC CGGGTCACGT GACCACCGGC
GCGCTCGTGG TGTCCGAGGA CGGCCGGCTG CTCCAGATCG CCCACAAGTC CCTCGGCCGC
TGGCTCAACC CCGGCGGCCA CGTCGAGCCC GAGGACGCCT CTCCGCTCGA CGCCGCACGC
CGCGAGCTGC TTGAGGAGAC CGGCCTCGGC GCCGAGCACA TCACGCTCCT CGGCGACCCG
ATCCTGCCGC TGGCCGTCGA CGCGCACCGC ATCCCGGCCA ACCCGGCGAA GGACGAACCA
GAGCACTGGC ACTTCGACTT CCGCTACGCC TTCCTCCTCA ACGGAATCCC GGGGACCACC
GAGGTCGAGC TCCAACTCGA AGAGGTCGAC GACCACCGCT GGATCCCCTT GGACCAGGCC
GGTCTCGGCG AGGACACCGC CCGCCTGGCC GCAGTCCTCG AAACCGCTGT CACAAACGCC
GCGGCCGGAG GGTCATAG
|
|---|
| Protein sequence | MYPPPPPARV TDTAIRAYLS RYLARHPDQT ERVRPFSEAL AAGTARMTDR RTLPGHVTTG
ALVVSEDGRL LQIAHKSLGR WLNPGGHVEP EDASPLDAAR RELLEETGLG AEHITLLGDP
ILPLAVDAHR IPANPAKDEP EHWHFDFRYA FLLNGIPGTT EVELQLEEVD DHRWIPLDQA
GLGEDTARLA AVLETAVTNA AAGGS
|
|---|
| |