Gene Caci_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0628 
Symbol 
ID8331957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp732619 
End bp734703 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content69% 
IMG OID644953780 
Producthypothetical protein 
Protein accessionYP_003111405 
Protein GI256389841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.244367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCGC AACTGCGCGC TTCGCTCTCG GCGCTGGGGG CGATGGCCCT CGGTGCCGTC 
GGCCTGCTGG CCGTCACGGT CCCGATGGCC CACGCTGCCG GGACCGTCTA CTACGTGGAC
TGCTCCGCCG CCTCGGACGG AACCGGGTCC TCGGGTTCTC CGTGGAACGC CCTCACGGAC
CCCGACGGAC ACGTCTTCGC CGCCGGCGAC ACGCTGTCCT TCAAGGCCGG GACCACCTGC
CACGGCGCGC TGACGCCGAA GGGTTCCGGC GCTTCCGGCT CGCCGATCAC CGTCGACGCC
TACGGTTCCG GCGCCGCGCC GGTGATCGAG GGCGGCGGCG CGACCGAGGC GACGGTGCAC
CTCGTCGACC AGAGCTACTG GACCATCAAG GGTCTGAAGG TCCAGAACAG CTCCTCCACG
CGGGCGCAGC ACGAGGGCAT CCTCGTCGAG GTCGCCGGCG CCGCGAACCA GGCCGGGATC
TCCGTCACCG GCAACGAGGT CGCGAACGTG GCGGGCTGGG GCGACAAGAC CGGGACGAAC
GCGTCGTGGT TCTCCTACTC GGCGGGCATC GCGGTGCGCG TGGCGACCGG GTCCGGCGTC
TTCAACGGCG TGTCGGTGTC GAACAACGCC ATCCATGACG CCGGGGGCGG CGGCATCAAG
GTCGAGGGCG AGACCACGGC CATGAACACC GGCGTGTACA TCGGGCACAA CACCCTGACC
GCGGACGGCG GCGACGGGAT CGTGGTGCAC GACAGCGACG CGCCGCTGGT GGAGTACAAC
ACCGCGACGG ACCTCGGGCT CGGGGCGTAC CCCTTCGTGG CCGGGAACTT CGCCGGGATG
TGGCCGTACC ACAGCAACAA TCCGACGTTC CAGCACAACA CCGTCGGCAC GCAGACCGGG
GTCGTGAACG ACGCGACCGC GTGGGACTGC GACATCAGCA ACACCGGCAC GTGCCTGTAC
CAGTACAACT ACTCCTACAA CAACGCCGGC GGCTTCTACC TCGACTGCCT GTCCGGCTGC
GGCGGCGCGG CGACGACCAC GAACGCGGTG CTGCGCTACA ACATCTCGCG CGACGACTGC
CGCTTCACGA ACTCCAGCAC CGGCACCGGC ACGCACTACA TCTACAACAA CACCTTCTTC
TGCCCAGGCA AGCCGATCAC GGACACGCTC GGCGGAAAAG TGGTGTGGCA GAACAACATC
TTCGTGGCGC CGACGGCCTC CTGGGCGTCG GATAACTCGG CGACATTCAC CGCCAACACG
TACTACGGCG GCGTCACGGC GCCCTCCTCC GGCGACACGG CAGCCCACAC CGCCGACCCG
CAGCTGATCA ACGACGCCGC GGGCACGCTC GCCATCAAGC TGCACACCGC CTCCCCCGAG
CGCGGTACCG GCGCGGTGGT GGCGAACAAC GGCGGCAAGG ACTACTTCGG CAACGCGGTC
TCCGCCACCA CCGCCCCGAA CCGCGGCGCC TACAACGGAC CGGGCGATGA CAGCGTCCTG
TCATTCTCGG CGGCCCTGAC CGACACCGCG GTCACCGCCG ACGCCAACCG CTGGGCCGGC
AGCCTGAACA GCGCGACCCA GAGCGGCAAG TCTTTCTCCG CGACCGCCCT GGCCGCCGCC
GGCCTGACGA AGGGCACCGA CGTGACAGCA TCCGGCATCG ACTTCGGACC CTGGCACCCC
CAACCCCTCG ACGCCACCGA CAACACGATC GCCACCGGCC AGACCATCGC CGTCACCGGC
ACCGGCACCA AACTCGGCAT CCTCGGCTTC AGCACCACCC ACGGCGTCAC CGAGCCCGGC
ACCCTCCACT TCACCGACGG CACCTCCCAG CCCTTCACCC TGACCCTCTC CGACTGGACC
GACACCACCC CCGCCACCGG CGACACCCTC GTCGCCAAGG CGGCCTACGC CAACCAGCAC
ACCTCGACCT ACAACGGCAC CACGACAACC GCGTCCGGCT CGTTCTCGAT CTGGGCGAAC
ACCGTGCCGC TCCCATCGGG CAAGACCCTG GCCTCGGTGA CCCTGCCGAA CCTGCCGGCG
TCGAACGCCA CGTCGCAGCA TGTGTTCGCG ATGGCGGTGG GGTGA
 
Protein sequence
MKAQLRASLS ALGAMALGAV GLLAVTVPMA HAAGTVYYVD CSAASDGTGS SGSPWNALTD 
PDGHVFAAGD TLSFKAGTTC HGALTPKGSG ASGSPITVDA YGSGAAPVIE GGGATEATVH
LVDQSYWTIK GLKVQNSSST RAQHEGILVE VAGAANQAGI SVTGNEVANV AGWGDKTGTN
ASWFSYSAGI AVRVATGSGV FNGVSVSNNA IHDAGGGGIK VEGETTAMNT GVYIGHNTLT
ADGGDGIVVH DSDAPLVEYN TATDLGLGAY PFVAGNFAGM WPYHSNNPTF QHNTVGTQTG
VVNDATAWDC DISNTGTCLY QYNYSYNNAG GFYLDCLSGC GGAATTTNAV LRYNISRDDC
RFTNSSTGTG THYIYNNTFF CPGKPITDTL GGKVVWQNNI FVAPTASWAS DNSATFTANT
YYGGVTAPSS GDTAAHTADP QLINDAAGTL AIKLHTASPE RGTGAVVANN GGKDYFGNAV
SATTAPNRGA YNGPGDDSVL SFSAALTDTA VTADANRWAG SLNSATQSGK SFSATALAAA
GLTKGTDVTA SGIDFGPWHP QPLDATDNTI ATGQTIAVTG TGTKLGILGF STTHGVTEPG
TLHFTDGTSQ PFTLTLSDWT DTTPATGDTL VAKAAYANQH TSTYNGTTTT ASGSFSIWAN
TVPLPSGKTL ASVTLPNLPA SNATSQHVFA MAVG