| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0625 |
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| Symbol | |
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| ID | 8331954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 729344 |
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| End bp | 730657 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953777 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003111402 |
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| Protein GI | 256389838 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.393195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCA GTAAGAACGT CCACCGCGCC GGCGTCATAG CCGCCGCGGT GGCCGTCTCG
GCCGCGAGCC TGTCGGCCTG TGGCAGCTCC AGCAAGCCCG GCACGTCCTC CGGCGCCAAG
TCCTCGGGCA GCACCTCGTT CACCTACTGG TCGATGTGGC AGCAGAACGA GCCGCAGGCC
AAGGTGATCA AGAAGGCCGC CGACGACTTC ACCGCCGCCA CCGGTATCAA GGTGACCATC
CAGTGGCAGG GCCGCGACGT CATCACCAAG CTGACCCCGA CGCTGCGCAC CGGCTCCTCG
GCGGACCTGG TCGACCAGTC GGTGAACGCG CTCGGCGCGC TGGTCGCCAA GGACGAGACC
ACCGACCTGA GCAGCCTGTA CGGCACCACG ATCCCCGGCG AGTCGCAGAC CGTCGGCCAG
GTCATCCCCG ACAGCTACAA GCCGTTCCTG AACGACAAGA ACGGCAAGCC TTTCATCGCG
CCTTACGAGG TCTCCTCCGA AGGCCTGTGG TTCGACGCGT CGAAGTTCCC CGCCCTCGCT
GCCAACCCGC CGAAGACCTG GGACGATCTG CTCGCGCTGT TCGACAAGGC CAAGGGCATG
GGGATGACGC CGGTCGCGGT CCCCGGCGAC GACAAGTACT GGGTGCTGCT GACCCTTCAG
CGCGAGCTGG GTACTGACAC CCTGAAGAAG TTGGCGAGCG ACAAGACCGG CGCCGCCTGG
GATGACCCGA AGGTCCTCAA GGCCGCGCAG CTGGTCCAAG CGATGCGCGA CAAGGGCGAC
TTCCTCAAGG GCTACGAGTC CAGCAAGAGC ATCGACGAAG AGGGTGACTG GGCCAAGGGA
CAGGCCGCCT TCTACCTGTC CGGCACGTGG GTTCCCTCCG AAGCCGCGCC GAACGCCGCT
GCCGGCTTCA CATTCGACAG CATCCAGCTG CCGGCCCTGG ACTCGGGCAA CACCGACACC
GGCATCAACT TCTTCGGCTT CGCGGTCCCC AAGACCGCCA AGCACTCCGA CGCCGCCGAG
AAGTTCGTGG CCTTCTTCAT GAAGAAGGAG GAGCTCTCCG GCATCTCGAC CCAGGCGCTG
AACCTCACAC CGCGCGCCGA CATCGCCCCG CCGGCCCAGC TGGCCTCGAT GAGCAAGGCG
CTGACCGGGA CCGTCTACGC CGACCAGGCG CACCTGTCCG TGGACTACGC GGACTGGACC
AACAAGATGC TGAACCCCGA GATGATCCGC CTGATCACCG GCCAGGACGA CGCCGCGAAG
TTCGTCGCCA ACGGCCGGCA GGGCACGATC GATTACTGGA AGTCCGCGTC GTGA
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| Protein sequence | MRTSKNVHRA GVIAAAVAVS AASLSACGSS SKPGTSSGAK SSGSTSFTYW SMWQQNEPQA
KVIKKAADDF TAATGIKVTI QWQGRDVITK LTPTLRTGSS ADLVDQSVNA LGALVAKDET
TDLSSLYGTT IPGESQTVGQ VIPDSYKPFL NDKNGKPFIA PYEVSSEGLW FDASKFPALA
ANPPKTWDDL LALFDKAKGM GMTPVAVPGD DKYWVLLTLQ RELGTDTLKK LASDKTGAAW
DDPKVLKAAQ LVQAMRDKGD FLKGYESSKS IDEEGDWAKG QAAFYLSGTW VPSEAAPNAA
AGFTFDSIQL PALDSGNTDT GINFFGFAVP KTAKHSDAAE KFVAFFMKKE ELSGISTQAL
NLTPRADIAP PAQLASMSKA LTGTVYADQA HLSVDYADWT NKMLNPEMIR LITGQDDAAK
FVANGRQGTI DYWKSAS
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