Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0623 |
Symbol | |
ID | 8331952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 726999 |
End bp | 728063 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953775 |
Product | regulatory protein DeoR |
Protein accession | YP_003111400 |
Protein GI | 256389836 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.369416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGCCG CGAGACGGCA CGCCCTGATC CTTCGCCTGG CCCGCGAACG CGGGTCGGTG CAGGTGGCCG AGCTGGTCGG CATCCTCGGA GTGTCGGACG TGACAGTCCG GCGCGACCTG GACCAGCTGG CCAAGGCCGG ACAACTGGAC AAGGTGCACG GCGGCGCGGT GCTGCCCGCC TCGGCCGAGC CCGCACCGCC GGCCCGGCAC CAGGATCCGG GCGGCGAGGG CGACCTGCCG GTCATCGGCG CGCTGATCCC CAAGTCCTCG TACTACTTCA ACCGGGTCGT CGACGGGATG CGCCGCGTGT TGCGCGAGCC CGAGGGACGG CTGCTGGTCG CCGTCTCGGA CTACCAGTCC GGGCAGGACC TGTCGCTGGC GATGGGCCTG GTGGACTCCG GGGCGCAGGC CGTACTGCTC GCGCCGGCGG ACGAAGTGGA GTGGGCCGGG GCGCTCGGCG TGCCGACGGT GTTGGTCGAG CGGCGGTCCT ACGGACCGGC GGCCGCGACC ACCTCGTGGG TCCGGACAGA CCACGAAACC GGTGCCGGGC TCGCGGTTCG GCATCTGCAC GAACTCGGAC ACCGCCGCAT CGCGATGTTC GCCCGCGGCG AGACACCGAC CTCCCGCAGT GTCCTGAACG GCTTCGAGCA GGCGGCCTCA GCACTGGCGC TACCGCAGAT GCCGCGCATC ATCGGCACCG ACCTCGCCGG CTGGCCGAAC TGGGGCGCGG AGCAGATAGA CGCCCTCGCC GAACGGCTGC GCGCCTCAGA GGCGACCGCA CTGCTGGTCC ACTCCGACGA GGACGCACTG GCGTTGCTGC AGAACGGTTT CGCCACGCGG TTCGCCGTAC CGCGCGAGAT GTCGATCGTC GCCTACGACG ACGAGTTCTC GGCACTGACG CGACCGGCAC TGACCGCGGT GTCGCCGCCG AAGGAGTCGG TCGGAGAACT GGCGGTGCGC ACGCTGCTGG ACCTGGTACG CGACCCCGGG GCGCCGGCGC GGCATGTGGA CGTCTCGCCG CGCCTGATCG TGCGGGAGTC GACGGGGGTC GCCCGCTCGG CGTAG
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Protein sequence | MLAARRHALI LRLARERGSV QVAELVGILG VSDVTVRRDL DQLAKAGQLD KVHGGAVLPA SAEPAPPARH QDPGGEGDLP VIGALIPKSS YYFNRVVDGM RRVLREPEGR LLVAVSDYQS GQDLSLAMGL VDSGAQAVLL APADEVEWAG ALGVPTVLVE RRSYGPAAAT TSWVRTDHET GAGLAVRHLH ELGHRRIAMF ARGETPTSRS VLNGFEQAAS ALALPQMPRI IGTDLAGWPN WGAEQIDALA ERLRASEATA LLVHSDEDAL ALLQNGFATR FAVPREMSIV AYDDEFSALT RPALTAVSPP KESVGELAVR TLLDLVRDPG APARHVDVSP RLIVRESTGV ARSA
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