| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0621 |
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| Symbol | |
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| ID | 8331950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 724301 |
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| End bp | 725380 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953773 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003111398 |
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| Protein GI | 256389834 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.273052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CCGACGCCAC CGTGCCGGTG ACCACGTGCT TCCGGCACAA CGGGCGCGAG
AGCCACATCC GCTGCACGCG CTGCGACCGG TACATCTGCC CCGACTGCAT GCGCAGTGCC
TCGGTGGGGT TTCAGTGCCC TGACTGTGTC CGCGACGGGA ACAAGGACGT ACGGCAGGCG
CGGACGGTGT TCGGCTCGCT GGCGACTGGC GGCACGCGTC CGGTCGTCAC CATCGCGCTC
ATCATGCTCA ACTTCGCGGT GTACGCGGCG GAATTGCTGA AGAACTCGGT CGTGGACCAG
CTCGGCATGC TCTCCGACGC GATGCGCGGA CCGCACGACG GCGTCTACCT GACCATGGCC
TCCCCGCCGC CGGGCTACCA CCCCATCGGC GTCGCGCACG GGCAGTGGTA CCGGATGATC
ACCTCGGCGT TCGTGCACAT CCTGCCCAAC CAGCCGCCGC TGGGACCGAT GCACATCTTG
TTCAACATGC TCTCGCTGTG GATGTTCGGC GTCGTGGTCG AGCAGCAGAT AGGGCGGGTG
CGGTACCTGG CGGCGTATCT GCTGTCGGCA GTCGGCGGAT CAGTGTTCTG CTACTACCTG
ACGGCGCCGT ACACGCAGTC CATCGGGGCG TCGGGGGCGG TCTTCGGGTT GATCGGGCTC
TACTTCGTCC TGAGCCGCAA GCTGCACTTC GATCCGCTCG GCGGACAGCG GCAACTGGTC
ATGGCAGTGG TGTGGCTGGT GCTGGCGTCG CGGTTCACCT CGTGGCAGGG ACACCTCGGC
GGGCTGCTCA CCGGAGCGGT GATCGGGCTG GTCTACGTCT ACGCGCCGCG GGGCGGTCGG
CAGGTCGCGA TCCAGGCGGC GGGGTTGGTC GCGATACTGG CTGTGTTGGT CGGGGCGACC
GTGGTGCGGA CGTCGGTGCT GCATTCGGAC GTTAGGGCTG CCGGTGCGGT GGGCGGCTGG
AGCAGCTTGG GCACCGGGAG CGGTCACAGC ACGAAGGGCG GGGTGGGGGA TGGACGAGGC
GTTGATCTGG CACGTGATCG CGCAGCAGAA GGCATGGCTG GACTCGCATC CGGACACTGA
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| Protein sequence | MTVPDATVPV TTCFRHNGRE SHIRCTRCDR YICPDCMRSA SVGFQCPDCV RDGNKDVRQA
RTVFGSLATG GTRPVVTIAL IMLNFAVYAA ELLKNSVVDQ LGMLSDAMRG PHDGVYLTMA
SPPPGYHPIG VAHGQWYRMI TSAFVHILPN QPPLGPMHIL FNMLSLWMFG VVVEQQIGRV
RYLAAYLLSA VGGSVFCYYL TAPYTQSIGA SGAVFGLIGL YFVLSRKLHF DPLGGQRQLV
MAVVWLVLAS RFTSWQGHLG GLLTGAVIGL VYVYAPRGGR QVAIQAAGLV AILAVLVGAT
VVRTSVLHSD VRAAGAVGGW SSLGTGSGHS TKGGVGDGRG VDLARDRAAE GMAGLASGH
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