Gene Caci_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0596 
Symbol 
ID8331924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp684167 
End bp687559 
Gene Length3393 bp 
Protein Length1130 aa 
Translation table11 
GC content71% 
IMG OID644953748 
ProductWGR domain-containing protein 
Protein accessionYP_003111374 
Protein GI256389810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTACG TCCTGGAACC GGTGGACGCT GTCGCAGGAC TGTTCGACAG GCGGTTCGAC 
CCCCGGACGC TGGTCATACC GCGCCGCGAC GGGAAGTCGG GGGACGCGGT GGCGCCGGTG
GAGCCCGCCG CGGACGCCGT CGCCGGCTTC GAACGCGTCT TCACCAAGGC GGCCCGCACC
GTCGAGCTCG TCCTCGGCCA CGCCGACACC GACGGCGACC TGGCCGAGGC TGTGCGGCAG
CCGGAATTCG GCGACCTGGC CGCGATGACG CCGCAGCAGG CTGCGATCGC CGCGGTCGTC
GTGCTCTACG ACGCCCCGAA GAACTACGAG CCCTACGTCC TGGTCGACGC CTGGGTGGCG
GCACGCGGTC TCGCCTTCGC CGCCGCCGCG ACGATCGAAA TCGGCGGCTT CGGTGTCTGG
ATCCCGCGCA AGGGACAGAA GATCCCGGCT CTGCGCCGCA AGGACCACGA CGCCGCCAAC
GCCCAAGAAC GCTTCGCGAT GGCCGCGCGG ATGCGCCGCT ACCTGGCCGC TGCCGACGCT
GACGAGTACG CCGCCGCCCT GGCCGACATC AGTGCCCTGC GAAGCACCGC CGACGTCCGC
AACACCTTCA TCTCCTTCCT GTTCCCCGAA CACGGCGACT GGGTCGAGCA GGACGTCTCC
GGACCGCTCG GCCGCCGCTG GGAGGTCCGC GACGGGCTCG CCGCCTGGCT GCTGATCGGT
GCGGTGAGCA CGCCGCAGCA GGCCGAGCGG CTGACCAAGT GGGTCCACGC CGACGCGCTG
CGGCTGTGCT CGGCGGCGAC CGCGACCATG GTCGCCACGA TCGGGCTGGA CCTGATCCCG
GCGATAGCGA ACTGGGCTGA GGACTACTGG GACGGCGTCG AAGCCCGGCA GCGCGTGCAA
CGACTCCTCG CCGGTTTCGA CAGCGACGAC GCGTTCCTGG CGCTGCTCGG CCAGCTCGCC
TACCGGGGAA CCTCGGCGGT GCTCGCCGAG GCGGCGCAAC GGTTTCCGGA GCGCGGCGTC
CGGCTGCTCG CCGAGGCGGC GCCGGACCAG CCGGCGTCAC GGACCGCCGT GGACCGCGTG
CTGCGGCTGA CCGTCACCAG CCGGACGGAG GCGGCCCGCG CCGTCGTGCC GCAGCTGGAC
GCCGAGGCGC GCGCACGCGT CGAGAAGCTG ATGAACGGCC TCGCGGCGCC GCTGCCCTCC
GCATCGCTGG ACGCCTTGCC GGAACTGCTG ACCACGCCGC CGTGGGAGCA GGCACGCGAG
ACGGTGAAGC CGGTCGTCGT CAAGGATCTG ATTCCCCCGT CCAGCAGCGA GGTCCTGTGG
CTGGACGACC AGGAGCGCGA GGACTGGCGC GCCGACACTC TCGGCGTGGA GCACAGCGAC
CGCGAGGACT GGGGCAAGCG CCTCGCCAAG GCGCTGGGAC GGCGCAACGC CTATCAGCTC
ATGGTGATCG TCATCCGCGG TCCGGAGGAG GAAGCCCGGC GGGCGCTCCG CAATCTCCAG
GACGGCTATT CCTACGACGC GCTCGACTGG TGCAGCACGG CGACCGCGCG CTTCGGCATC
GACGCGTTCC CCGCCGCGAT GAGCGCCGTG CGCACCAGCC CGCTGGAGAA CGCCGGTCTC
CTGCTGCCGT TCGCCTGCTC CGAGATAGCG CCGCTCGTCG CCGATTGGAA CCTGCGGCTG
AAGACGCTGC GCTCCCCGGC GCAGGCGTGG ATGCGCCGCC ATCCCGCGCT TACTGTTCGA
ACCCTGATAC CCGCCGCCCT CGGCAAGGCC GGGCGGACCC GGCAAGCTGC CGAAGCCGCG
CTGCGCTTCC TGGTCTCCGC CGGATTCCAG GACGAGATCC GTGCCGAGGC GGCGACCTAC
GGCACCGAGG CTGACGCCGG CGTCGTCCAG CTGCTGGCCC AGGACCCGCT GTTCGCCGGG
CTCCCCAAGA CGATGCCGGA GCCGCCGAGT TGGGCCGAGC CGGAGAGCCT GCCACAGCTG
CTGATAACCG GACGCAAGGA AGCGCTTCCG CCGTCGGCGG TGCGCAGCGT GGTGCGGATG
CTGATGGTCT CCGGTACCGA GGACCCGTAC CCCGGGCTGG AGACCGTAAA AGAACTCTGC
GACACCCGCT CGCTCGAGGA CTTCGCCTGG GGCGTCTTTG AGAACTGGCA AACCGCCGAC
CATCCCGCGA AACAGTCCTT TGCGATGGAC GCTCTGCGCT GGTTCGGCGG CGACGAGGCG
GTCCGCCGGC TGTCCCCGCT GATCCGGGTC TGGCCCGGCG ACGGCGGCCA CTCGCGGGCG
GTCGCCGGTC TGGACGTGCT GACCGCGATC GGCGGCGACA CCGCCTTGCT GCACCTCTAC
GGGATCTCGC AGAAGGGCAA GTTCCGGGGG CTGAAGGAGA GTGCGCAGGA GCGCGTCGCC
TCCATCGCCA AGGAGCTGCG CCTGACCCGC GACCAGCTCG GCGACCGGTT GGTCCCCGAC
CTCGGGCTCG ACGGCTCCGG CTCGATGGAG TTGGACTACG GCCCGCGCCG CTTTCGCGTC
TTCTTCGACG AACAGCTCAA GCCGGGCGTC AGCGACGAGA GCGGCAAGCG CCTGAAGTCC
CTGCCCAAGC CCGGCGTGAA GGACGATGCC GAGCTGGCAC CCGCCGCGTA CCAGCGTTTC
AGTGGTCTGA AGAAGGACGT GCGGACTCTC GCCGCCGACC AGATCACCCG GCTGGAGATG
GCGATGGTCG CTCGCCGCCG CTGGACGAAG ACGGACTTCG AGGAGTACTT CGTCGGCCAT
CCGTTGCTGC GCCATCTCGT CCGACGGCTG GTGTGGTCCG ACTTCCGTCC GGACGGTACG
GGCGTGCGCG GGACGTTCCG GGTCGCCGAG GACGCCTCCT ACGCCGACGT CGCCGACGAC
CCGTACACGC TGCCCGACGA CGCGCTGATC GGGGTCGCGC ACCCAGTGGA CCTCGGTGAG
GACCTGCCGC GCTGGTCGGA GCTGTTCGCC GATTACGAGA TCCTGCAACC CTTCCGGCAG
CTCGGTCGCC CGGTGCTGGC GTTCACCGCC GAGGAGTCGG AGCTCAGGCT ACTGACACGC
TTCGCCGGCG TCCGGACGCC TGCCGGCAAG GTGCTCGGTC TGGAGCGTCG CGGCTGGAAG
CGCAGCGACC CGGCTGACGG CGGCTGGCAG GGCTACCTGC TGCGTGAGCT GCCCGACGGC
CGTACCGCGG TCGTCGAGCT GGAGCCCGGG TTCGGCGCGG GCTGGGCTGG CGAGGCCGAA
GACCAGCTGC TGAGCGGCGT GTGGATCAGC ACGGATACCA ACCGCTACAC CGGCTACTGG
CGGCGCGGCG AGGGCGGCGA ACTCCTGGCG TCGCTGGATC CGGTGACCGC CTCGGAGATC
CTGAACGACC TGAGCGAGGT GACCGCCGGA TGA
 
Protein sequence
MGYVLEPVDA VAGLFDRRFD PRTLVIPRRD GKSGDAVAPV EPAADAVAGF ERVFTKAART 
VELVLGHADT DGDLAEAVRQ PEFGDLAAMT PQQAAIAAVV VLYDAPKNYE PYVLVDAWVA
ARGLAFAAAA TIEIGGFGVW IPRKGQKIPA LRRKDHDAAN AQERFAMAAR MRRYLAAADA
DEYAAALADI SALRSTADVR NTFISFLFPE HGDWVEQDVS GPLGRRWEVR DGLAAWLLIG
AVSTPQQAER LTKWVHADAL RLCSAATATM VATIGLDLIP AIANWAEDYW DGVEARQRVQ
RLLAGFDSDD AFLALLGQLA YRGTSAVLAE AAQRFPERGV RLLAEAAPDQ PASRTAVDRV
LRLTVTSRTE AARAVVPQLD AEARARVEKL MNGLAAPLPS ASLDALPELL TTPPWEQARE
TVKPVVVKDL IPPSSSEVLW LDDQEREDWR ADTLGVEHSD REDWGKRLAK ALGRRNAYQL
MVIVIRGPEE EARRALRNLQ DGYSYDALDW CSTATARFGI DAFPAAMSAV RTSPLENAGL
LLPFACSEIA PLVADWNLRL KTLRSPAQAW MRRHPALTVR TLIPAALGKA GRTRQAAEAA
LRFLVSAGFQ DEIRAEAATY GTEADAGVVQ LLAQDPLFAG LPKTMPEPPS WAEPESLPQL
LITGRKEALP PSAVRSVVRM LMVSGTEDPY PGLETVKELC DTRSLEDFAW GVFENWQTAD
HPAKQSFAMD ALRWFGGDEA VRRLSPLIRV WPGDGGHSRA VAGLDVLTAI GGDTALLHLY
GISQKGKFRG LKESAQERVA SIAKELRLTR DQLGDRLVPD LGLDGSGSME LDYGPRRFRV
FFDEQLKPGV SDESGKRLKS LPKPGVKDDA ELAPAAYQRF SGLKKDVRTL AADQITRLEM
AMVARRRWTK TDFEEYFVGH PLLRHLVRRL VWSDFRPDGT GVRGTFRVAE DASYADVADD
PYTLPDDALI GVAHPVDLGE DLPRWSELFA DYEILQPFRQ LGRPVLAFTA EESELRLLTR
FAGVRTPAGK VLGLERRGWK RSDPADGGWQ GYLLRELPDG RTAVVELEPG FGAGWAGEAE
DQLLSGVWIS TDTNRYTGYW RRGEGGELLA SLDPVTASEI LNDLSEVTAG