| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0595 |
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| Symbol | |
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| ID | 8331923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 681617 |
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| End bp | 683875 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644953747 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003111373 |
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| Protein GI | 256389809 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCC GGTTCGCGGC ATTCATGGCG CTGTGGACCG TCTTCTACTA CTCGGTTCCC
AGTTTGCACC TGCTGACCTG GACCGTGATC GGCCTGGGCG GGGTCGGCGC GGTGCTGGTC
GGGGTCCGCC GGTACCGCCC GCACACCCCG CTCGCCTGGT ACCTGCTGGC CGGGGCGATG
CTGACGCTGG TCGGCGGGGA CACCGTCTAC AACCTGCTGA CCGACGTCTT CGGGCAGGTC
GAGCCGTTCC CCTCGGTCGC CGACGCGATC TACCTGGCGA CCTACCCCCT GGCGGCCGGC
GGCGTGCTGC TCATGGTGCG GCGGCGCAGT CCGCTGCGCG ACCGGGCGGC GCTGATCGAC
GCCGTCATCC TGACCACGGC GGCGGCCCTG CTGCTGTGGG TCTACATCAT CACCCCGACC
GTGGACAACG GGAAGCAGCC CTGGCTGAGC AGCGCGGTGT CCATCGCCTA CCCGCTCGGC
GACGTGCTGC TGCTGGCGGT GACCGCGCGG CTGGCCACCG GCGGGGGGCT GCGCGGGCCG
GCGGTGCGGC TGCTGCTGCT CGGCGTGCTC GGGCTGACCG GGTCCGACGT CGCCTACGCG
CTGGTCCGGC TCTACGGCGA TTGGCACGTC GGTACCCCTG CCGACCTGGG CTGGGTGGTC
TTCTACGTGG CCTGGGGCGC GGCCGGGCTC GCGCCGTCGA TGACCGAGCT GACCGAGCCG
GTGGCCCGCG CCAGACACGG CGCGGACAGC GCGCGGGTGA TCCCGCTGGC GGTCGCGGCG
CTGGTCGCGC CGACCGTGCT GATGATCGAA TCGCTGGAGA CGGACCTGCG CGACGGCCCG
GTCATCGCCG TGACCTCGGC GTTGATGTTC CTGCTGGTGC TGCTGCGGCT GTATCTGGCC
GGCCGGCAGA CCCGCGAGCT GGACAACCGC GCGCACACCC GGGCCATGCT GCGCGAGCTG
AAACACCGCG CCTACCGGGA CTCGCTGACC GGCCTGGGCA ACCGGCTGCG CTTCCAGGAG
CGGGCCGAGC GCGCCCTGGC CCGGGCCCAG GACTGCGGCG GCGAGGCGGC GATGCTGCTC
ATCGACCTGG ACAACTTCAA AGAGGTTAAC GACACCCAGG GGCACAAGGT CGGCGACGAG
CTGCTGGTCG CCGCCGGGCA GCGGATAGCC GGGGCGGTGC GCCCGGGTGA CCTGCCGGTC
CGCCTCGGCG GCGACGAGTT CGCGGTCCTG CTGTCCGACG GCGCGACCGA GACGGCGGCG
GTCGCCCTGG CGCAGCGGCT GATCGGGGTG CTGGCCGAAC CGTTCCGGCT GGCCGGGGCG
CCGGTGCCGG TGCGCGCCAG CATCGGGGTC GCGACCAGCT CCGGCGGCGC CGGGGGCACC
GAGGAGGTGC TGTTCCGCAA CGCCGACCTG GCGTTGTACG CGGCCAAGGC GGACGGCAAG
GGCACCTGGC GGCTGTTCGA ACCAAGCTTG TACGAAGCGG CCCTTCAGCG GCTGGCGCTG
CGCACCGGGC TGGACCGGGC TTTGGCCGTC GGGGAGTTCG AGCTGCACTA CCAGCCGATC
GTGGAGCTGC AGGGCCCGCC GCGGGTCGCC GGGTTCGAGG CGCTGGTGCG CTGGCGGCAT
CCCCAGCTCG GGCTGCTGTC GCCGGGGAAC TTCGTGCCGG TCGCCGAGGA GACCGGGCAG
ATCACCCCGA TCGGCGCGTG GATCCTGCGG CAGGCGACCG CCGACGCCGC CGCGGCCGGG
TTCGGGTACG TGGCCGTCAA CGTCTCCCCG CACCAGTTCA GCAACGGCGG GTTCGTCGAC
ACGGTGCGCT CGGCGCTGCG CGCGGCGGAC CTGCCCGCCG ACCGGCTGAC CGTGGAGATC
ACCGAGAACG TCTTCCTGCA CGAGGCGACC GCCAACGCGC TGCTGGACCT GCAGCGGCTG
GCGATGCTCG GGGTGCGGGT CGCCATCGAC GACTTCGGGA CCGGGTACTC CTCGATCGGG
TACCTGCGGG ACCTGAAGTT CGACGTGATC AAGGCCGACA AGTCGTTCGT CGACTGGATC
GCGAGCAAGA AGGACCACGA ACGGCTGCTC CGGGGAATCG TGCATGTGGC GGGAACCATG
GACATCGCCG TGGTCGCCGA GGGGGTCGAG ACGGTCGAGC AGCGGGATCT GCTGCGCGAC
ATGGGGTGTG CCTACGCGCA GGGCTTCTTC TACTCGCCGG CGGTGCCGCT GGGGGAGACG
TCCGGTGTGC GGGCCACCAT AGAGATGGGA GAGAACTGA
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| Protein sequence | MALRFAAFMA LWTVFYYSVP SLHLLTWTVI GLGGVGAVLV GVRRYRPHTP LAWYLLAGAM
LTLVGGDTVY NLLTDVFGQV EPFPSVADAI YLATYPLAAG GVLLMVRRRS PLRDRAALID
AVILTTAAAL LLWVYIITPT VDNGKQPWLS SAVSIAYPLG DVLLLAVTAR LATGGGLRGP
AVRLLLLGVL GLTGSDVAYA LVRLYGDWHV GTPADLGWVV FYVAWGAAGL APSMTELTEP
VARARHGADS ARVIPLAVAA LVAPTVLMIE SLETDLRDGP VIAVTSALMF LLVLLRLYLA
GRQTRELDNR AHTRAMLREL KHRAYRDSLT GLGNRLRFQE RAERALARAQ DCGGEAAMLL
IDLDNFKEVN DTQGHKVGDE LLVAAGQRIA GAVRPGDLPV RLGGDEFAVL LSDGATETAA
VALAQRLIGV LAEPFRLAGA PVPVRASIGV ATSSGGAGGT EEVLFRNADL ALYAAKADGK
GTWRLFEPSL YEAALQRLAL RTGLDRALAV GEFELHYQPI VELQGPPRVA GFEALVRWRH
PQLGLLSPGN FVPVAEETGQ ITPIGAWILR QATADAAAAG FGYVAVNVSP HQFSNGGFVD
TVRSALRAAD LPADRLTVEI TENVFLHEAT ANALLDLQRL AMLGVRVAID DFGTGYSSIG
YLRDLKFDVI KADKSFVDWI ASKKDHERLL RGIVHVAGTM DIAVVAEGVE TVEQRDLLRD
MGCAYAQGFF YSPAVPLGET SGVRATIEMG EN
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