| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0582 |
|---|
| Symbol | |
|---|
| ID | 8331910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 667233 |
|---|
| End bp | 668954 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953734 |
|---|
| Product | glycosyl transferase family 39 |
|---|
| Protein accession | YP_003111360 |
|---|
| Protein GI | 256389796 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCC TCGCCCCGAC CCGTTCCTCG CTGCCGGATG ACGACAGCGA GGAGGATTAC
GGCGGCCGCC GCCGCGGCCG TAGCGGCTCG CACCGCGAAC GCGGACGCGT CTGGTGGCGC
CCGAACCTGG ACCCGCGCGA CGACGAGCAG GGCGAGCTGA CGCTGCGCGA GCGCCTGGTC
CCCTCCTTCG CGCGCGAGCC GTGGTGGGTG ACCTGGGGCT TCCCGCTGCT GATCACGCTG
GTCGGCGGGT TCATGCGGTT CTGGCATCTG GGCCTGCCCA AATGGGTCAT CTTCGACGAG
ACCTACTACG CCAAGGACGC CTGGGCGACC ATCCACTTCG GCCACGAGAT CGGCTGGCAC
GACGACGGCC CGGGCGTCGG CATGGCCAAC GACGACCACG CCATCATCGC CAACCCGCAC
ATCTGGCGGA CGCTGGTCGC CAACCACCAG GGCAACGCGG TGCACCCGCC GGTCGGCAAG
TGGATGATCG GCGCCGGCGA GTGGCTGTTC GGCTTCACCC CGTTCGGGTG GCGCTTCATC
CCGGCGGTCT GCGGGACCCT GGCGATCCTG ATGACCGCGC GCATCGCCCG GCGCATGTTC
CGCTCCACGC TCATCGGCTG CCTGGCCGGC GTGCTCCTGG CCGCCGACGG CCTGGAGTTC
GTGATGAGCC GCACCGCGCT GCTGGACATC TTCGTGATGT TCTGGACGCT GGCCGCCTTC
GGCTGCTTCC TCGTCGACCG CGACAAGATG CGCTCCAGAC TCGTCGACTG GCGGGAGAGC
TTCCCCTCCA CTCCGCTGCC CGACGACGTC AAGGCGCCGC CGCTGGGCTG GCGTCCCTGG
CGCATCGCCG GCGCGGTCTG CCTGGGGCTG GACCTGGGCA CCAAGTGGAG CGGGCTGTGG
ATCATCCCCT GCTTCATCGC GATGTCGCTG CTGTGGGACC ACGCCGCGCT GCGCGCCGTG
GGCATCCGGC GCCACTGGTC CGGCTTCCTC CGCCGCGAGA CCTGGCAGAC CACGCTGCTC
GGGCTGCTGG TCCTGGCCAC CTACGCCGCC ACCTGGACCG GCTGGTTCGT CACCAAGGAC
GGCAACTACC GCCAGTGGGC CGCGCAGAAC AACGCGATCC ACGTCCCGGT CCTGTCCGCG
CTGCGCAGCT GGTGGGAGTA CCACTGGCAG ACCTATCACT TCCACGTGAA CCTGGACTCG
CCGCACGCGT ACATGTCGAA CCCGTGGAGC TGGCTGGTCA TGGGCCGCCC CACCGACTAC
TACTACTGCT CCAAGGGCGC GACGGGCTGC CCGCCGCTGG CCGCCGACCA GCACCAGCAG
GTCCTGGCGC TCGGCACGCC GCCGCTGTGG TGGTTCGCGA GCCTGGCGCT GGTCTGGTGC
TGCTGGCGCT GGATCGCCCG CCGCGACTGG CGCGCCGGCT CGATCCTGTG CGGGATGCTC
GCGGCGTGGG CGTTCTGGCT GAACTACCAG CACCGGACGA TCTTCACGTT CTACGCCGTC
GCCTTCGTGC CGTTCATGTG CCTCGCGGCG GCGTACCTGC TGGGGGTGAT CGTCGGACGC
TCCGACGCGC TCCAGTACCG GCGGGTCTGG GGCGCGGTCG TCGCCGGCGC CATCACCGTC
TACATCCTGG TGATGTTCAT CTACTTCTAT CCGATCCTGT CGGCGCAGAC GATCACCTAC
AACCAATGGC TCGACCGCAT GTGGTGGCCC AGCTGGATCT AG
|
|---|
| Protein sequence | MTSLAPTRSS LPDDDSEEDY GGRRRGRSGS HRERGRVWWR PNLDPRDDEQ GELTLRERLV
PSFAREPWWV TWGFPLLITL VGGFMRFWHL GLPKWVIFDE TYYAKDAWAT IHFGHEIGWH
DDGPGVGMAN DDHAIIANPH IWRTLVANHQ GNAVHPPVGK WMIGAGEWLF GFTPFGWRFI
PAVCGTLAIL MTARIARRMF RSTLIGCLAG VLLAADGLEF VMSRTALLDI FVMFWTLAAF
GCFLVDRDKM RSRLVDWRES FPSTPLPDDV KAPPLGWRPW RIAGAVCLGL DLGTKWSGLW
IIPCFIAMSL LWDHAALRAV GIRRHWSGFL RRETWQTTLL GLLVLATYAA TWTGWFVTKD
GNYRQWAAQN NAIHVPVLSA LRSWWEYHWQ TYHFHVNLDS PHAYMSNPWS WLVMGRPTDY
YYCSKGATGC PPLAADQHQQ VLALGTPPLW WFASLALVWC CWRWIARRDW RAGSILCGML
AAWAFWLNYQ HRTIFTFYAV AFVPFMCLAA AYLLGVIVGR SDALQYRRVW GAVVAGAITV
YILVMFIYFY PILSAQTITY NQWLDRMWWP SWI
|
|---|
| |