Gene Caci_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0580 
Symbol 
ID8331908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp665201 
End bp666250 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID644953732 
Producthypothetical protein 
Protein accessionYP_003111358 
Protein GI256389794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.746192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGA ACTGGCAGCA GGAACCCGCA CCGCGGCTCT CCACCGCGCG TGACCGTGCC 
GAAGCAGGTC CGGAGTCGAT TCCGGTTATG CCGCACGGAC TCAAGCCGGT CCCCATGTCC
CGTCCCGGCG GTCCGCGTCC GGACGCTCCG GCGCCGCCCT ACCAGCCGCA GTCACGCTGG
CAGGAGCCGC AGGTCTACAT AGCGAACACC TATATAGACA GTCCCTATAC GCCGCCCACT
CCGCCTCCCT CACAGCCGCC CCCGACTGCC GACCCGCGTA TCGGCAACTC TCGCGTCGGC
AACCCCAGCG ACGGCAATTC GACGATGATG GTCGCGGTCG GCACGGTCCA GCCCGCCGCC
TCGCGCCCGC CGGAGGTCAG CACCGTCGAG GAGGCCGAAC GCATCCTCGG CTACGCCGTC
GACTCCCTGG ACGCCGACCC GGACCTGTAC TCCATCGGCA CGGTCACCGA CGGCGCGGTC
TGCCTGATCC CCGACGACGG CCGCTGGTCC ATCTTCCTGG CCGACGGCGG ACGGCGCCGC
TACGCCGGCT CGTTCGACAA CCCCGAGCAG GCGGCGATCC ACTTCGCCGG CGTCCTGCTC
ATCGCCGCCG CCGAACGCGG AGCGCTCCCC AAGCACGCCG CCGGACGCGC GGCGCTGCCC
GGACGCAGCA CCGATCCGCT GGCCGAAATG CTCGCCGGAC CGCCGATCAC TCCTTTGGCC
GGCGATCCGC CGACCACGCT GTACTCCGAC CAGCGCCTCA CGATCCTGAC TCCGGGCACG
GAGGTGGACC GCTTCGGGGA CCAACAGGGC AACACCGTCT ACGCGGCGCG CACCAGGTAC
CCGCACCGTT CCCTGCCTCC GGACTACATA GGGCGGCCCT ACAGGGTGTA CCGAGTCCGT
GACCCACTGC GTGCCCTCAC CGGTACGGCG ATTCCGTGGT TCGGACAGCC GGGAGGCGGT
ATGGCGTACC TGTTGCCGCG CCCTATAAGA GACCTTCTCC ATGAGGGAGC CCTGGTAGAG
ATCCCCTCGG CAACACTGGC TCCTTCCTAA
 
Protein sequence
MTENWQQEPA PRLSTARDRA EAGPESIPVM PHGLKPVPMS RPGGPRPDAP APPYQPQSRW 
QEPQVYIANT YIDSPYTPPT PPPSQPPPTA DPRIGNSRVG NPSDGNSTMM VAVGTVQPAA
SRPPEVSTVE EAERILGYAV DSLDADPDLY SIGTVTDGAV CLIPDDGRWS IFLADGGRRR
YAGSFDNPEQ AAIHFAGVLL IAAAERGALP KHAAGRAALP GRSTDPLAEM LAGPPITPLA
GDPPTTLYSD QRLTILTPGT EVDRFGDQQG NTVYAARTRY PHRSLPPDYI GRPYRVYRVR
DPLRALTGTA IPWFGQPGGG MAYLLPRPIR DLLHEGALVE IPSATLAPS