Gene Caci_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0579 
Symbol 
ID8331907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp664125 
End bp665069 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content70% 
IMG OID644953731 
Productpeptidase M48 Ste24p 
Protein accessionYP_003111357 
Protein GI256389793 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.912207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCTT CCCTTTCAGA TCGCCGTACC GACGCCCGCT TCCGGGCCGA CCGCAACCTC 
AGCGCGCGGA TGCTGTCCGT CATGGTGCTG CTGGCTGCCG TCTACGGCGC CGCGATCCTT
CTGATGATCC GCTTCATGGG ACGCGCCTGG CCGCTCGGGC TCGCCGTGGT CGTCGCCTTC
GCCGTGTTCC AGATCCTGAC CTCCGGCAAG GTCGCGATGC GCACCATGGG TGCCCGCGAA
GTGAGCGCCG AGGAGGAGCC GGAGCTGCAC GCTCTGGTCG ACCGCCTCTG CGCCTTGTCC
GGTATGAAGA AGCCGACCAT CGCGGTGGCC GAGTCCCGGA TCCCGAACGC CTGCGCCGTC
GGACGCTCCA AGGGCGGCGC TACCCTGTGC GTGACCCGCA GCCTGCTGGA CACGCTGGAC
CCGCCGGAGC TCGAGGGCGT CATCGCCCAC GAGATGGCGC ACATCGAGCA CGGCGACGCC
GCGGTGATGA CCGTCGCGGC CTTCGTCGGC GTCCTGGCCG GACTGGTCGC CCGGGTCGGA
CTGCGCTTCA TCTACATCGG CGGCCGGGCC CGCGGCCTGT GGCACATCAT CGTCGCGGCC
ATCGGCCTGA TCGCCCTGGC CACCGCGACC TGGTTCGTCT CGCTGGTCCT GACCCGCTCG
CTGTCCCGCT ACCGCGAGTT CGCCGCAGAC CGCTCGGCGG CGCAGCTGAC CGGCAACCCC
TCGGCGCTGG CCTCCGCCCT GGCGAAGGTC GAGGCCAAGG TGCACGGCGG AGGCGGCATC
CCGCAGACCG ACCTGCGCAA GGCCGGCGCG CTGAACGCCT TCTACTTCGC CCCCGTGACC
TCCGCCAAGA CCACAGCGCA CCACCTGCTG TCCACGCACC CGACGACGCA GGCTCGGCTG
GACCGCTTGG TCAAGATGTC TACTGAGATG TCAAAGAACG GCTAA
 
Protein sequence
MSSSLSDRRT DARFRADRNL SARMLSVMVL LAAVYGAAIL LMIRFMGRAW PLGLAVVVAF 
AVFQILTSGK VAMRTMGARE VSAEEEPELH ALVDRLCALS GMKKPTIAVA ESRIPNACAV
GRSKGGATLC VTRSLLDTLD PPELEGVIAH EMAHIEHGDA AVMTVAAFVG VLAGLVARVG
LRFIYIGGRA RGLWHIIVAA IGLIALATAT WFVSLVLTRS LSRYREFAAD RSAAQLTGNP
SALASALAKV EAKVHGGGGI PQTDLRKAGA LNAFYFAPVT SAKTTAHHLL STHPTTQARL
DRLVKMSTEM SKNG