Gene Caci_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0575 
Symbol 
ID8331903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp660744 
End bp661550 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content74% 
IMG OID644953727 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_003111353 
Protein GI256389789 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.849708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA AGGTTGCTTT CCTGGGACTG GGCGCGATGG GCGCGCCGAT GGCGGCGCGC 
GTCATCGGCG CCGGCTACGA GGTCGTGGTG TGGAACCGGA CAGCCGCCCG CACCGAGCCG
CTGGTCGCGC TCGGCGCGGG CGCGGCGGCG GATCCGGCCG GGGCGGTGGC CGGCGCCGAG
TTCGTGATCA CGATGCTCTC CGACCCGGCC GCGGTGACGG CTGTCGCCGA GGCCATCGCC
GGAGCGCTGC GCCCGGACGC GGTCCTGGTC GAGATGTCCA CGATCGGACC GGACGGAACC
GAGCGAATCA GAGGCCTGAT TCCCGCCTCG GTCGGCCTGG TCGACGCCCC GGTGATGGGC
AGTGTGGACC GCGCCGCCGA CGGGACGCTG GCGGTGCTGG CCGGCGGCAC GCCGCAGGAC
CTGGCGCGCG TGGCCGATCT GCTGAAGCTG TTCGGCAACG TCACCGAATG CGGCGGACCC
GGAACCGGCT CGGCCCGCAA GCTGGTGCTG ATCAGCGGCA TCGTCGCCGG GGTGGCGGTG
GTCGGCGAGA CACTGGCGCT GGCCGAGAAG CTCGGTCTGC CCGACCCCCG CGCGGTGCTG
GAGGCCAGCC CGCTGGGCGG ACTGGTGGCC CGCGCCTTCG CCACCGGCGT CGACTTCTCC
GCCGAGATGG CCGCGAAGGA CCTGCGGCTG GCCGGCGAGG TGCTGGACCT GCCGGTGATC
GCCGCCGCGC AGCGCGCGCT GGAGGCGGTC CCGGACCCGG ACGCCGATCT CGGCGAAGCG
GTGCGGGCGC TGAACGCAAA GCGCTGA
 
Protein sequence
MTTKVAFLGL GAMGAPMAAR VIGAGYEVVV WNRTAARTEP LVALGAGAAA DPAGAVAGAE 
FVITMLSDPA AVTAVAEAIA GALRPDAVLV EMSTIGPDGT ERIRGLIPAS VGLVDAPVMG
SVDRAADGTL AVLAGGTPQD LARVADLLKL FGNVTECGGP GTGSARKLVL ISGIVAGVAV
VGETLALAEK LGLPDPRAVL EASPLGGLVA RAFATGVDFS AEMAAKDLRL AGEVLDLPVI
AAAQRALEAV PDPDADLGEA VRALNAKR